RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 GM2AP17900 193 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 FLT3LGP49771 235 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 IKBKEQ14164 716 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 FAM210AQ96ND0 272 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 PDE10AQ9Y233 779 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 KCNE2Q9Y6J6 123 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 WEE1P30291 646 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 HOXA11P31270 313 aaPredicted RBP16.47■□□□□ 0.23
TCOF1-206ENST00000445265 SPAM1P38567 509 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 GSK3BP49841 420 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 CDK9P50750 372 aaKnown RBP16.47■□□□□ 0.23
TCOF1-206ENST00000445265 ALDH6A1Q02252 535 aaKnown RBP16.47■□□□□ 0.23
TCOF1-206ENST00000445265 UBE3AQ05086 875 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 SULT2A1Q06520 285 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 SOX4Q06945 474 aaPredicted RBP16.47■□□□□ 0.23
TCOF1-206ENST00000445265 CEACAM7Q14002 265 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 CYP2A13Q16696 494 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 PRR23BQ6ZRT6 265 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 PIM3Q86V86 326 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 TTC30BQ8N4P2 665 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 OR6K2Q8NGY2 324 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 OR10A6Q8NH74 314 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 ZUFSPQ96AP4 578 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 APOLD1Q96LR9 279 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 DNAJB9Q9UBS3 223 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 VPS4AQ9UN37 437 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 A0A1W2PP18 115 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 GSTM1P09488 218 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 MTHFD1P11586 935 aaKnown RBP16.47■□□□□ 0.23
TCOF1-206ENST00000445265 PRPS2P11908 318 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 SETMARQ53H47 684 aaPredicted RBP16.47■□□□□ 0.23
TCOF1-206ENST00000445265 OGFRL1Q5TC84 451 aaPredicted RBP16.47■□□□□ 0.23
TCOF1-206ENST00000445265 RAB2BQ8WUD1 216 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 CLP1Q92989 425 aaKnown RBP16.47■□□□□ 0.23
TCOF1-206ENST00000445265 EPB41L1Q9H4G0 881 aa16.47■□□□□ 0.23
TCOF1-206ENST00000445265 NRAPQ86VF7 1730 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 GLI3P10071 1580 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 A0A0U1RQF3 1178 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 ZCWPW2A0A1B0GU75 182 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 CDH1P12830 882 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 ATN1P54259 1190 aaPredicted RBP16.46■□□□□ 0.23
TCOF1-206ENST00000445265 INAQ16352 499 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 TECRLQ5HYJ1 363 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 ZNF678Q5SXM1 525 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 CHADLQ6NUI6 762 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 DNAJB8Q8NHS0 232 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 NODALQ96S42 347 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 SCML2Q9UQR0 700 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 ECM29Q5VYK3 1845 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 LINC00854A0A1B0GVQ3 168 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 UNCXA6NJT0 531 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 H3BSA7 217 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 ANGPTL1O95841 491 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 LEPRP48357 1165 aaKnown RBP16.46■□□□□ 0.23
TCOF1-206ENST00000445265 RAB15P59190 212 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 KCNA10Q16322 511 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 ZDHHC20Q5W0Z9 365 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 SLCO6A1Q86UG4 719 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 ZNF558Q96NG5 402 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 REXO4Q9GZR2 422 aaKnown RBP16.46■□□□□ 0.23
TCOF1-206ENST00000445265 DNAJC11Q9NVH1 559 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 SELENONQ9NZV5 590 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 TRAV19A0A0A6YYK7 116 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 PDLIM1O00151 329 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 TPP2P29144 1249 aaPredicted RBP16.46■□□□□ 0.23
TCOF1-206ENST00000445265 PRKCQQ04759 706 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 DAG1Q14118 895 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 LINGO4Q6UY18 593 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 SERPINA9Q86WD7 417 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 KIAA1191Q96A73 305 aa16.46■□□□□ 0.23
TCOF1-206ENST00000445265 TUBA8Q9NY65 449 aaPredicted RBP16.46■□□□□ 0.23
TCOF1-206ENST00000445265 EPOP01588 193 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 ALOX5P09917 674 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 MTPNP58546 118 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 PWP1Q13610 501 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 FAM174BQ3ZCQ3 159 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 RGMBQ6NW40 437 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 FUT10Q6P4F1 479 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 KBTBD6Q86V97 674 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 NPLOC4Q8TAT6 608 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 TSPEARQ8WU66 669 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 TADA1Q96BN2 335 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 COX4I2Q96KJ9 171 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 NSMCE3Q96MG7 304 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 QRFPRQ96P65 431 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 RERGLQ9H628 205 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 KIAA1522Q9P206 1035 aaPredicted RBP16.45■□□□□ 0.22
TCOF1-206ENST00000445265 LCHNA4D1U4 455 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 DENRO43583 198 aaKnown RBP16.45■□□□□ 0.22
TCOF1-206ENST00000445265 CYP4B1P13584 511 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 POLR2EP19388 210 aaKnown RBP16.45■□□□□ 0.22
TCOF1-206ENST00000445265 RPIAP49247 311 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 CYP4Z2PQ8N1L4 340 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 CSGALNACT1Q8TDX6 532 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 PLD4Q96BZ4 506 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 BRD9Q9H8M2 597 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 POPDC3Q9HBV1 291 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 KRCC1Q9NPI7 259 aaPredicted RBP16.45■□□□□ 0.22
TCOF1-206ENST00000445265 C1orf109Q9NX04 203 aa16.45■□□□□ 0.22
TCOF1-206ENST00000445265 KLHL28Q9NXS3 571 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms