RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 SLC28A2O43868 658 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 PMPCBO75439 489 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 C1QL1O75973 258 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 UBXN7O94888 489 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 CCL4P13236 92 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 TNNT1P13805 278 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 ZNF8P17098 575 aaPredicted RBP7.66□□□□□ -1.18
CD44-211ENST00000442151 COMTP21964 271 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 UGT1A3P35503 534 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 SPAM1P38567 509 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 ARL4DP49703 201 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 TMEM115Q12893 351 aaPredicted RBP7.66□□□□□ -1.18
CD44-211ENST00000442151 LY6DQ14210 128 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 TGIF1Q15583 401 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 PPP2R5EQ16537 467 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 TBR1Q16650 682 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 LONRF2Q1L5Z9 754 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 ALS2CLQ60I27 953 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 ARMC6Q6NXE6 501 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 SPOCD1Q6ZMY3 1216 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 ADGRG6Q86SQ4 1221 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 TRIM74Q86UV6 250 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 AMZ2Q86W34 360 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 KMT5CQ86Y97 462 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 CCDC50Q8IVM0 306 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 KATNAL2Q8IYT4 538 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 CARFQ8N187 725 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 CNTD1Q8N815 330 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 RCBTB1Q8NDN9 531 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 PATE1Q8WXA2 126 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 UBXN4Q92575 508 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 SLC45A3Q96JT2 553 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 C9orf72Q96LT7 481 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 TRIB3Q96RU7 358 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 WDR24Q96S15 920 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 CD180Q99467 661 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 CHP1Q99653 195 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 CCM2Q9BSQ5 444 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 FSD1LQ9BXM9 530 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 PACSIN1Q9BY11 444 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 TRIM5Q9C035 493 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 PDE7BQ9NP56 450 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 FOXJ2Q9P0K8 574 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 EPHA6Q9UF33 1036 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 ACSL5Q9ULC5 683 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 SHOC2Q9UQ13 582 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 ALG6Q9Y672 507 aa7.66□□□□□ -1.18
CD44-211ENST00000442151 LOC285095A0A1B0GVY8 99 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 C5orf60A6NFR6 353 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 C3orf70A6NLC5 250 aaPredicted RBP7.65□□□□□ -1.18
CD44-211ENST00000442151 A8MU76 341 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 H7C0C1 242 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 CRTAMO95727 393 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 C9P02748 559 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 PTMAP06454 111 aaKnown RBP7.65□□□□□ -1.18
CD44-211ENST00000442151 MSH3P20585 1137 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 PTPN3P26045 913 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 NDUFS1P28331 727 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 CDKN2BP42772 138 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 ATP5OP48047 213 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 CSRP3P50461 194 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 NAP1L1P55209 391 aaKnown RBP7.65□□□□□ -1.18
CD44-211ENST00000442151 WNT3AP56704 352 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 DYNLT1P63172 113 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 ACY1Q03154 408 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 ZBTB17Q13105 803 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 PRKD1Q15139 912 aaPredicted RBP7.65□□□□□ -1.18
CD44-211ENST00000442151 PTPRRQ15256 657 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 TAZQ16635 292 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 TMTC4Q5T4D3 741 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 KAZNQ674X7 775 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 PCSK4Q6UW60 755 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 MFSD7Q6UXD7 560 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 GLT6D1Q7Z4J2 308 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 TRAPPC5Q8IUR0 188 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 TMTC1Q8IUR5 882 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 GPR26Q8NDV2 337 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 HTR3CQ8WXA8 447 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 ULK4Q96C45 1275 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 DCUN1D1Q96GG9 259 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 SLC25A18Q9H1K4 315 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 CLMPQ9H6B4 373 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 VPS37BQ9H9H4 285 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 PRDM8Q9NQV8 689 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 SPTLC3Q9NUV7 552 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 RSPH14Q9UHP6 348 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 TMEM184BQ9Y519 407 aaPredicted RBP7.65□□□□□ -1.18
CD44-211ENST00000442151 KCTD3Q9Y597 815 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 HEBP2Q9Y5Z4 205 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 B3GALT1Q9Y5Z6 326 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 OAS3Q9Y6K5 1087 aaKnown RBP7.65□□□□□ -1.18
CD44-211ENST00000442151 COLEC10Q9Y6Z7 277 aa7.65□□□□□ -1.18
CD44-211ENST00000442151 MN1Q10571 1320 aaPredicted RBP7.64□□□□□ -1.19
CD44-211ENST00000442151 CCDC66A2RUB6 948 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 PMS2P1A4D2B8 440 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 A6NCN8 305 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 GOLGA6L9A6NEM1 432 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 CFAP99D6REC4 459 aa7.64□□□□□ -1.19
CD44-211ENST00000442151 POP7O75817 140 aaKnown RBP7.64□□□□□ -1.19
CD44-211ENST00000442151 RASSF9O75901 435 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms