RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 SLC6A11P48066 632 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 CLCN7P51798 805 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 INHBCP55103 352 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 CLCQ05315 142 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 GRM2Q14416 872 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 SQLEQ14534 574 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 ZNF234Q14588 700 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 TMEM52BQ4KMG9 183 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 WASHC2DQ5SRD0 308 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 TMEM215Q68D42 235 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 C16orf89Q6UX73 402 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 GPRIN3Q6ZVF9 776 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 NEK10Q6ZWH5 1172 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 ERN2Q76MJ5 926 aaKnown RBP5.95□□□□□ -1.46
VPS50-205ENST00000441602 ZSWIM9Q86XI8 627 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 DDHD1Q8NEL9 900 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 MCOLN3Q8TDD5 553 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 ASZ1Q8WWH4 475 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 ZFYVE19Q96K21 471 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 ZNF514Q96K75 400 aaPredicted RBP5.95□□□□□ -1.46
VPS50-205ENST00000441602 SERPINI1Q99574 410 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 EBF4Q9BQW3 602 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 HGH1Q9BTY7 390 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 RIOK2Q9BVS4 552 aaKnown RBP5.95□□□□□ -1.46
VPS50-205ENST00000441602 C1QTNF3Q9BXJ4 246 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 C20orf27Q9GZN8 174 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 ZMYND15Q9H091 742 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 RDH14Q9HBH5 336 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 HPS4Q9NQG7 708 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 KLC4Q9NSK0 619 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 CLDND1Q9NY35 253 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 OARD1Q9Y530 152 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 MYLKQ15746 1914 aa5.95□□□□□ -1.46
VPS50-205ENST00000441602 E9PBE3 544 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 UBDO15205 165 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 KLK8O60259 260 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 KLHL41O60662 606 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 ATG13O75143 517 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 SKAP2O75563 359 aaPredicted RBP5.94□□□□□ -1.46
VPS50-205ENST00000441602 WFS1O76024 890 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 OTCP00480 354 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 CATP04040 527 aaKnown RBP5.94□□□□□ -1.46
VPS50-205ENST00000441602 FGF4P08620 206 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 RPS17P08708 135 aaKnown RBP5.94□□□□□ -1.46
VPS50-205ENST00000441602 LAMP2P13473 410 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 HNRNPLP14866 589 aaKnown RBP eCLIP5.94□□□□□ -1.46
VPS50-205ENST00000441602 PCSK2P16519 638 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 SP100P23497 879 aaPredicted RBP5.94□□□□□ -1.46
VPS50-205ENST00000441602 PGM1P36871 562 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 PSMD8P48556 350 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 ATP4BP51164 291 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 PTSQ03393 145 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 KLF10Q13118 480 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 RIPK1Q13546 671 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 ATP13A5Q4VNC0 1218 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 CYB5D1Q6P9G0 228 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 PARS2Q7L3T8 475 aaKnown RBP5.94□□□□□ -1.46
VPS50-205ENST00000441602 PARP9Q8IXQ6 854 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 DDIASQ8IXT1 998 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 ATL1Q8WXF7 558 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 FUBP1Q96AE4 644 aaKnown RBP5.94□□□□□ -1.46
VPS50-205ENST00000441602 TMEM159Q96B96 161 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 NUS1Q96E22 293 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 LRRC3BQ96PB8 259 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 VPS35Q96QK1 796 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 MYADMQ96S97 322 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 KXD1Q9BQD3 176 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 C1QTNF7Q9BXJ2 289 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 SHCBP1LQ9BZQ2 653 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 ARMCX1Q9P291 453 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 OPTCQ9UBM4 332 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 ZDHHC2Q9UIJ5 367 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 IGLV3-16A0A075B6K0 115 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 TMEM265A0A087WTH1 108 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 TRIM24O15164 1050 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 GRID2O43424 1007 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 KATNA1O75449 491 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 STAMBPO95630 424 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 UROSP10746 265 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 FCARP24071 287 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 GPR1P46091 355 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 PGGT1BP53609 377 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 ELF3P78545 371 aaPredicted RBP5.94□□□□□ -1.46
VPS50-205ENST00000441602 STX5Q13190 355 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 CUL3Q13618 768 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 PCBP2Q15366 365 aaKnown RBP eCLIP5.94□□□□□ -1.46
VPS50-205ENST00000441602 CES4AQ5XG92 561 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 ZNF776Q68DI1 518 aaPredicted RBP5.94□□□□□ -1.46
VPS50-205ENST00000441602 LIPIQ6XZB0 460 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 Q6ZVL8 140 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 ASRGL1Q7L266 308 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 HSD11B1LQ7Z5J1 315 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 NLRP8Q86W28 1048 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 C12orf40Q86WS4 652 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 LSMEM2Q8N112 164 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 KIF2BQ8N4N8 673 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 RP9Q8TA86 221 aaKnown RBP5.94□□□□□ -1.46
VPS50-205ENST00000441602 TRPC4APQ8TEL6 797 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 BTN2A2Q8WVV5 523 aa5.94□□□□□ -1.46
VPS50-205ENST00000441602 ELMO1Q92556 727 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms