RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 ERMP1Q7Z2K6 904 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 ZNF467Q7Z7K2 595 aaPredicted RBP9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 ANKRD46Q86W74 232 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 FNDC5Q8NAU1 212 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 HMGCLL1Q8TB92 370 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 TANKQ92844 425 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 FEM1CQ96JP0 617 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 TEX37Q96LM6 180 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 SLC9A7Q96T83 725 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 CENPOQ9BU64 300 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 GIMAP4Q9NUV9 329 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 CD274Q9NZQ7 290 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 ANAPC2Q9UJX6 822 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 ADAM28Q9UKQ2 775 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 RNF112Q9ULX5 631 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 GIT1Q9Y2X7 761 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 PMF1-BGLAPU3KQ54 211 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 ARID2Q68CP9 1835 aa9.85□□□□□ -0.83
CDC42SE1-202ENST00000439374 PNMA8CA0A1B0GUJ8 204 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 BTN3A1O00481 513 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 B4GALT3O60512 393 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 TLR5O60602 858 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 MITFO75030 526 aaPredicted RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 SEC24AO95486 1093 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 DNTTP04053 509 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 HSPA1AP0DMV8 641 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 HSPA1BP0DMV9 641 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 SLC2A3P11169 496 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 PRDX3P30048 256 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 OR4D2P58180 307 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 CREB5Q02930 508 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 ARHGAP12Q8IWW6 846 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 TNIP2Q8NFZ5 429 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 FRS2Q8WU20 508 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 KCNN1Q92952 543 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 SERPINB11Q96P15 392 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 GPR78Q96P69 363 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 C9orf16Q9BUW7 83 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 FUNDC2Q9BWH2 189 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 ZYG11BQ9C0D3 744 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 MTRRQ9UBK8 725 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 KIAA0100Q14667 2235 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 TMEM114B3SHH9 223 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 ARVCFO00192 962 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 KPNA4O00629 521 aaPredicted RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 TSC22D2O75157 780 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 APOA4P06727 396 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 TCF3P15923 654 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 CCNCP24863 283 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 ALDH3B2P48448 385 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 AGTR2P50052 363 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 PLA2G16P53816 162 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 CDKN2DP55273 166 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 CCL23P55773 120 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 FRG1Q14331 258 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 MAPRE2Q15555 327 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 MAPRE1Q15691 268 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 SMN1Q16637 294 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 SOWAHCQ53LP3 525 aaPredicted RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 TSTD2Q5T7W7 516 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 CST9Q5W186 159 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 DCP1BQ8IZD4 617 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 FAM86B1Q8N7N1 296 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 OR4K2Q8NGD2 314 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 NSMCE2Q96MF7 247 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 EPB41L1Q9H4G0 881 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 EML4Q9HC35 981 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 EXOSC4Q9NPD3 245 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 VPS45Q9NRW7 570 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 CMTM6Q9NX76 183 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 PCDHB3Q9Y5E6 796 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 DUSP11O75319 330 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 IPO13O94829 963 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 GOT2P00505 430 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 MZF1P28698 734 aaPredicted RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 PRDX6P30041 224 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 MTHFRP42898 656 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 CDKN1CP49918 316 aaPredicted RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 VAC14Q08AM6 782 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 TRIP4Q15650 581 aaPredicted RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 TAB1Q15750 504 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 CCDC85BQ15834 202 aaPredicted RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 PTPRNQ16849 979 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 VARS2Q5ST30 1063 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 TIGD7Q6NT04 549 aaPredicted RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 SFRP1Q8N474 314 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 RTL3Q8N8U3 475 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 SEPT8Q92599 483 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 UBE2FQ969M7 185 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 TMBIM1Q969X1 311 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 EGFL8Q99944 293 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 MRPL57Q9BQC6 102 aaKnown RBP9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 WDR37Q9Y2I8 494 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 PRKAB1Q9Y478 270 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 PCDHB5Q9Y5E4 795 aa9.84□□□□□ -0.83
CDC42SE1-202ENST00000439374 CCDC162PA2VCL2 907 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 PSMD3O43242 534 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 CLPXO76031 633 aa9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 PABPC1P11940 636 aaKnown RBP9.83□□□□□ -0.84
CDC42SE1-202ENST00000439374 CAPGP40121 348 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms