RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 PELI3Q8N2H9 469 aa8.33□□□□□ -1.08
NIF3L1-208ENST00000436412 CBARPQ8N350 705 aaPredicted RBP8.33□□□□□ -1.08
NIF3L1-208ENST00000436412 SFRP1Q8N474 314 aa8.33□□□□□ -1.08
NIF3L1-208ENST00000436412 LZTR1Q8N653 840 aa8.33□□□□□ -1.08
NIF3L1-208ENST00000436412 CCDC185Q8N715 623 aa8.33□□□□□ -1.08
NIF3L1-208ENST00000436412 EMC1Q8N766 993 aa8.33□□□□□ -1.08
NIF3L1-208ENST00000436412 PAF1Q8N7H5 531 aa8.33□□□□□ -1.08
NIF3L1-208ENST00000436412 CPA5Q8WXQ8 436 aa8.33□□□□□ -1.08
NIF3L1-208ENST00000436412 STN1Q9H668 368 aaKnown RBP8.33□□□□□ -1.08
NIF3L1-208ENST00000436412 SUDS3Q9H7L9 328 aaPredicted RBP8.33□□□□□ -1.08
NIF3L1-208ENST00000436412 PDFQ9HBH1 243 aa8.33□□□□□ -1.08
NIF3L1-208ENST00000436412 SARS2Q9NP81 518 aaKnown RBP8.33□□□□□ -1.08
NIF3L1-208ENST00000436412 SIX2Q9NPC8 291 aa8.33□□□□□ -1.08
NIF3L1-208ENST00000436412 METTL5Q9NRN9 209 aaKnown RBP8.33□□□□□ -1.08
NIF3L1-208ENST00000436412 PCDHGA6Q9Y5G7 932 aa8.33□□□□□ -1.08
NIF3L1-208ENST00000436412 NIPBLQ6KC79 2804 aaeCLIP8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 ARHGAP42A6NI28 874 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 PSMD11O00231 422 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 TOX3O15405 576 aaPredicted RBP8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 PALMO75781 387 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 SLC2A4P14672 509 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 MMP8P22894 467 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 F8A1P23610 371 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 TNFRSF8P28908 595 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 DLSTP36957 453 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 RENBPP51606 427 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 HDAC4P56524 1084 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 NOMO3P69849 1222 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 HHEXQ03014 270 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 DPTQ07507 201 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 SEMA5AQ13591 1074 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 IL11RAQ14626 422 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 RFTN1Q14699 578 aaPredicted RBP8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 CNGA3Q16281 694 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 RAB6CQ53S08 254 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 CDKAL1Q5VV42 579 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 ZNF677Q86XU0 584 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 PLXDC1Q8IUK5 500 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 CREBRFQ8IUR6 639 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 AVL9Q8NBF6 648 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 GPT2Q8TD30 523 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 SLC37A2Q8TED4 501 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 FAM172AQ8WUF8 416 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 NCSTNQ92542 709 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 DTD2Q96FN9 168 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 OR2M4Q96R27 311 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 MAGEB5Q9BZ81 275 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 SLC29A3Q9BZD2 475 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 ULBP3Q9BZM4 244 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 TWSG1Q9GZX9 223 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 RAB6CQ9H0N0 254 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 LRRC19Q9H756 370 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 APMAPQ9HDC9 416 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 B4GALT6Q9UBX8 382 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 CROTQ9UKG9 612 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 PCDHGB7Q9Y5F8 929 aa8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 PCDHGA9Q9Y5G4 932 aaKnown RBP8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 MRPS18BQ9Y676 258 aaKnown RBP8.32□□□□□ -1.08
NIF3L1-208ENST00000436412 A1L4Q6 167 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 PIPSLA2A3N6 862 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 GOLGA6L3A6NEY3 463 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 C21orf140B9A014 251 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 H3BS24 57 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 J3KR12 359 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 CREB3O43889 395 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 LRCH4O75427 683 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 CREG1O75629 220 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 SORBS2O94875 1100 aaKnown RBP8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 HEXIM1O94992 359 aaKnown RBP8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 MT-ND3P03897 115 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 PYGLP06737 847 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 PNMA6AP0CW24 399 aaPredicted RBP8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 RNF224P0DH78 156 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 CYP2A6P11509 494 aaPredicted RBP8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 KRT3P12035 628 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 VIPR1P32241 457 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 ETV3P41162 512 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 GARSP41250 739 aaKnown RBP8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 RGRP47804 291 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 POLD2P49005 469 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 PGDP52209 483 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 PYCR3Q53H96 274 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 TAF3Q5VWG9 929 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 NAA35Q5VZE5 725 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 PAPD7Q5XG87 772 aaKnown RBP8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 RAET1GQ6H3X3 334 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 HPS6Q86YV9 775 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 GALNT13Q8IUC8 556 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 SLC34A3Q8N130 599 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 PYROXD2Q8N2H3 581 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 THAP4Q8WY91 577 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 STAMBPL1Q96FJ0 436 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 DPH2Q9BQC3 489 aaPredicted RBP8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 HERPUD2Q9BSE4 406 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 CINPQ9BW66 212 aaPredicted RBP8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 MLXIPLQ9NP71 852 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 CASS4Q9NQ75 786 aa8.31□□□□□ -1.08
NIF3L1-208ENST00000436412 SIDT1Q9NXL6 827 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms