RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 BCKDKO14874 412 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 PSMD3O43242 534 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 PTPN2P17706 415 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 HTR1EP28566 365 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 CASP3P42574 277 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 CLCN5P51795 746 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 OAZ1P54368 228 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 ISL1P61371 349 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 TRAF3Q13114 568 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 CDK5R2Q13319 367 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 RBBP7Q16576 425 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 BEND5Q7L4P6 421 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 FBXO16Q8IX29 292 aaPredicted RBP11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 FAM126BQ8IXS8 530 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 ELMOD1Q8N336 334 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 CELF2-AS1Q8N7Q2 184 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 DYNC2LI1Q8TCX1 351 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 ZNF419Q96HQ0 510 aaPredicted RBP11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 TXNDC15Q96J42 360 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 COLEC11Q9BWP8 271 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 EMILIN2Q9BXX0 1053 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 MUC13Q9H3R2 512 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 ZBTB20Q9HC78 741 aaPredicted RBP11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 FBXO8Q9NRD0 319 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 MAGEL2Q9UJ55 1249 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 C3orf18Q9UK00 162 aa11.44□□□□□ -0.58
HMGCS1-202ENST00000433297 CITO14578 2027 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 EFCAB9A8MZ26 197 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 ENPP3O14638 875 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 MATN4O95460 622 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 CD36P16671 472 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 IL12AP29459 219 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 GGT5P36269 586 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 FOXM1Q08050 763 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 TOP3AQ13472 1001 aaPredicted RBP11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 PTPRCAPQ14761 206 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 CLCA4Q14CN2 919 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 OR4D1Q15615 310 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 HID1Q8IV36 788 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 OR10A6Q8NH74 314 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 BTN2A3PQ96KV6 586 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 OSBPL10Q9BXB5 764 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 AS3MTQ9HBK9 375 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 CNGB3Q9NQW8 809 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 HOXC10Q9NYD6 342 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 MARCH4Q9P2E8 410 aaPredicted RBP11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 FBXW11Q9UKB1 542 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 KCTD3Q9Y597 815 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 HBP1O60381 514 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 PRKD3O94806 890 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 RCAN2Q14206 197 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 B3GALNT2Q8NCR0 500 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 SLC47A1Q96FL8 570 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 TEPSINQ96N21 525 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 CAMKK2Q96RR4 588 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 DCSTAMPQ9H295 470 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 R3HDMLQ9H3Y0 253 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 ACTR8Q9H981 624 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 WDR6Q9NNW5 1121 aaKnown RBP11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 NECTIN3Q9NQS3 549 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 DKK3Q9UBP4 350 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 FAM50BQ9Y247 325 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 GPSM3Q9Y4H4 160 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 ASB14A6NK59 587 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 CCRL2O00421 344 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 MT-ND2P03891 347 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 FYNP06241 537 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 CHRNB1P11230 501 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 EIF2DP41214 584 aaKnown RBP11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 CLK3P49761 638 aaKnown RBP11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 GEMP55040 296 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 FAM209AQ5JX71 171 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 C9orf57Q5W0N0 161 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 KIAA0930Q6ICG6 404 aaPredicted RBP11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 CATSPERGQ6ZRH7 1159 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 DET1Q7L5Y6 550 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 TMEM179BQ7Z7N9 219 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 GALNT13Q8IUC8 556 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 L3HYPDHQ96EM0 354 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 CDK15Q96Q40 435 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 MYOCQ99972 504 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 RBM4BQ9BQ04 359 aaKnown RBP11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 RBM4Q9BWF3 364 aaKnown RBP11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 UGT2B28Q9BY64 529 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 DUSP16Q9BY84 665 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 SLIRPQ9GZT3 109 aaKnown RBP11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 TREX1Q9NSU2 369 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 SCN3BQ9NY72 215 aa11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.43□□□□□ -0.58
HMGCS1-202ENST00000433297 LOC100506127A0A0U1RQW1 187 aa11.42□□□□□ -0.58
HMGCS1-202ENST00000433297 UBA6A0AVT1 1052 aaPredicted RBP11.42□□□□□ -0.58
HMGCS1-202ENST00000433297 TSPAN1O60635 241 aa11.42□□□□□ -0.58
HMGCS1-202ENST00000433297 TULP3O75386 442 aa11.42□□□□□ -0.58
HMGCS1-202ENST00000433297 HLA-DQB2P05538 268 aa11.42□□□□□ -0.58
HMGCS1-202ENST00000433297 LCKP06239 509 aa11.42□□□□□ -0.58
HMGCS1-202ENST00000433297 ZNF37AP17032 561 aaPredicted RBP11.42□□□□□ -0.58
HMGCS1-202ENST00000433297 NPR3P17342 541 aa11.42□□□□□ -0.58
HMGCS1-202ENST00000433297 PFKLP17858 780 aa11.42□□□□□ -0.58
HMGCS1-202ENST00000433297 ARSDP51689 593 aa11.42□□□□□ -0.58
HMGCS1-202ENST00000433297 WNT3AP56704 352 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms