RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 B4GAT1O43505 415 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 NOBOXO60393 691 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 AVILO75366 819 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 POP7O75817 140 aaKnown RBP5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 PRAMEF1O95521 474 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 GAS8O95995 478 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 RPLP0P05388 317 aaKnown RBP5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 APRTP07741 180 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZNF7P17097 686 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 MSH3P20585 1137 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 MGAT1P26572 445 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 RPL10P27635 214 aaKnown RBP5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 PBLDP30039 288 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 AKT1P31749 480 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 DRG2P55039 364 aaKnown RBP5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 OR1D5P58170 312 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 CRADDP78560 199 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 XIAPP98170 497 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 PDE1BQ01064 536 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 GPS1Q13098 491 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 SEMA5AQ13591 1074 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 PEX6Q13608 980 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 ITGA9Q13797 1035 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 GTF2H3Q13889 308 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 SMAD1Q15797 465 aaKnown RBP5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 HIF1AQ16665 826 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 INSCQ1MX18 579 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 AMZ1Q400G9 498 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 C14orf28Q4W4Y0 310 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 FNBP1LQ5T0N5 605 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 GPRC6AQ5T6X5 926 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 HES3Q5TGS1 186 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 DRICH1Q6PGQ1 229 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 CES3Q6UWW8 571 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 CCNI2Q6ZMN8 369 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 USP53Q70EK8 1073 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 LRRTM4Q86VH4 590 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZNF761Q86XN6 746 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 PHYKPLQ8IUZ5 450 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 NAGSQ8N159 534 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 GALNT15Q8N3T1 639 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 SDR16C5Q8N3Y7 309 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 ARL10Q8N8L6 244 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 GPR156Q8NFN8 814 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 ACTRT1Q8TDG2 376 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 RTP4Q96DX8 246 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 SGF29Q96ES7 293 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 SCARF2Q96GP6 870 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 CDKN2AIPNLQ96HQ2 116 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 DNAJC1Q96KC8 554 aaKnown RBP5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 TBATAQ96M53 351 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZNF778Q96MU6 729 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 VPS35Q96QK1 796 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 NAP1L3Q99457 506 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 RMI1Q9H9A7 625 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 CHRAC1Q9NRG0 131 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 VPS18Q9P253 973 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 TBC1D29Q9UFV1 150 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 SLC2A6Q9UGQ3 507 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 APPL1Q9UKG1 709 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 ATXN7L1Q9ULK2 861 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 PSMD13Q9UNM6 376 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 CLCA2Q9UQC9 943 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZKSCAN5Q9Y2L8 839 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 MSRB2Q9Y3D2 182 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 NEUROG3Q9Y4Z2 214 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 PCDHGA1Q9Y5H4 931 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 SAR1BQ9Y6B6 198 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 AK5Q9Y6K8 562 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 SLC30A1Q9Y6M5 507 aa5.69□□□□□ -1.5
HMGB3P24-201ENST00000433260 ZNF106Q9H2Y7 1883 aaKnown RBP5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 CABIN1Q9Y6J0 2220 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 PRAMEF33A0A0G2JMD5 474 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 A0A1W2PQM1 296 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 CCDC162PA2VCL2 907 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 CTAGE9A4FU28 777 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 FAM221BA6H8Z2 402 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 ERI2A8K979 691 aaKnown RBP5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 PDZK1P1A8MUH7 402 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 GOLGA8MH3BSY2 632 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 GAPDHSO14556 408 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 CHUKO15111 745 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 KMOO15229 486 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 VEGFDO43915 354 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 PPFIA2O75334 1257 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 CSO75390 466 aaKnown RBP5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 SUN1O94901 812 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 POLBP06746 335 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 GP1BAP07359 652 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 CDK4P11802 303 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 TCP1P17987 556 aaKnown RBP5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 IDSP22304 550 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 ADRA1DP25100 572 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 MPSTP25325 297 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 CASQ1P31415 396 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 HADHAP40939 763 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 PAFAH1B1P43034 410 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 MAPK9P45984 424 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 NPY2RP49146 381 aa5.68□□□□□ -1.5
HMGB3P24-201ENST00000433260 ARSDP51689 593 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms