RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 PMPCBO75439 489 aa14.63□□□□□ -0.07
MSH5-208ENST00000429846 RASSF9O75901 435 aa14.63□□□□□ -0.07
MSH5-208ENST00000429846 PTMSP20962 102 aa14.63□□□□□ -0.07
MSH5-208ENST00000429846 RPL10P27635 214 aaKnown RBP14.63□□□□□ -0.07
MSH5-208ENST00000429846 TMEM115Q12893 351 aaPredicted RBP14.63□□□□□ -0.07
MSH5-208ENST00000429846 TFDP2Q14188 446 aa14.63□□□□□ -0.07
MSH5-208ENST00000429846 GPR18Q14330 331 aa14.63□□□□□ -0.07
MSH5-208ENST00000429846 TCEAL1Q15170 157 aa14.63□□□□□ -0.07
MSH5-208ENST00000429846 ATP13A5Q4VNC0 1218 aa14.63□□□□□ -0.07
MSH5-208ENST00000429846 KHDC1Q4VXA5 237 aaKnown RBP14.63□□□□□ -0.07
MSH5-208ENST00000429846 C6orf15Q6UXA7 325 aaPredicted RBP14.63□□□□□ -0.07
MSH5-208ENST00000429846 GDAP1Q8TB36 358 aa14.63□□□□□ -0.07
MSH5-208ENST00000429846 TFB1MQ8WVM0 346 aaKnown RBP14.63□□□□□ -0.07
MSH5-208ENST00000429846 RSC1A1Q92681 617 aa14.63□□□□□ -0.07
MSH5-208ENST00000429846 STAMBPL1Q96FJ0 436 aa14.63□□□□□ -0.07
MSH5-208ENST00000429846 OR6C1Q96RD1 312 aa14.63□□□□□ -0.07
MSH5-208ENST00000429846 VAT1Q99536 393 aa14.63□□□□□ -0.07
MSH5-208ENST00000429846 EPN3Q9H201 632 aa14.63□□□□□ -0.07
MSH5-208ENST00000429846 NHEJ1Q9H9Q4 299 aaPredicted RBP14.63□□□□□ -0.07
MSH5-208ENST00000429846 SPTLC3Q9NUV7 552 aa14.63□□□□□ -0.07
MSH5-208ENST00000429846 KCND3Q9UK17 655 aa14.63□□□□□ -0.07
MSH5-208ENST00000429846 KCTD3Q9Y597 815 aa14.63□□□□□ -0.07
MSH5-208ENST00000429846 SPO11Q9Y5K1 396 aa14.63□□□□□ -0.07
MSH5-208ENST00000429846 LOC285095A0A1B0GVY8 99 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 OR52A4PA6NMU1 304 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 AURKAO14965 403 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 PSTPIP1O43586 416 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 SPOPO43791 374 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 MFAP3LO75121 409 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 NDUFA10O95299 355 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 MT-ND3P03897 115 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 FGF5P12034 268 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 DLSTP36957 453 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 SPAM1P38567 509 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 CDKN2BP42772 138 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 LEPRP48357 1165 aaKnown RBP14.62□□□□□ -0.07
MSH5-208ENST00000429846 SEPHS1P49903 392 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 DRG2P55039 364 aaKnown RBP14.62□□□□□ -0.07
MSH5-208ENST00000429846 DMPKQ09013 629 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 ITGA9Q13797 1035 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.62□□□□□ -0.07
MSH5-208ENST00000429846 LDLRAP1Q5SW96 308 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 KLHL35Q6PF15 583 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 MFSD7Q6UXD7 560 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 PPP1R3BQ86XI6 285 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 PTRH1Q86Y79 214 aaKnown RBP14.62□□□□□ -0.07
MSH5-208ENST00000429846 RASGRP3Q8IV61 690 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 KLHL6Q8WZ60 621 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 UBP1Q9NZI7 540 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 TMPRSS11EQ9UL52 423 aa14.62□□□□□ -0.07
MSH5-208ENST00000429846 KIAA0754O94854 1291 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 RECKO95980 971 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 NELFEP18615 380 aaKnown RBP14.61□□□□□ -0.07
MSH5-208ENST00000429846 NFKB1P19838 968 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 HLA-DPA1P20036 260 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 FECHP22830 423 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 CD68P34810 354 aaPredicted RBP14.61□□□□□ -0.07
MSH5-208ENST00000429846 WNT3AP56704 352 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 SH3BP2P78314 561 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 WASHC5Q12768 1159 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 TAZQ16635 292 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 DEFB109BQ30KR1 87 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 LACTB2Q53H82 288 aaPredicted RBP14.61□□□□□ -0.07
MSH5-208ENST00000429846 CACHD1Q5VU97 1274 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 IRGCQ6NXR0 463 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 C16orf46Q6P387 395 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 KDELC1Q6UW63 502 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 GLT6D1Q7Z4J2 308 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 AMZ2Q86W34 360 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 VSTM4Q8IW00 320 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 TTC30BQ8N4P2 665 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 DDHD1Q8NEL9 900 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 UBXN4Q92575 508 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 P3H4Q92791 437 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 ABHD17AQ96GS6 310 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 FCRL4Q96PJ5 515 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 FCRL5Q96RD9 977 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 CHP1Q99653 195 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 BPIFA1Q9NP55 256 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 PDE7BQ9NP56 450 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 IL26Q9NPH9 171 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 SMOXQ9NWM0 555 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 IL17CQ9P0M4 197 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 SEMA5BQ9P283 1151 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 KLHL8Q9P2G9 620 aaPredicted RBP14.61□□□□□ -0.07
MSH5-208ENST00000429846 CROTQ9UKG9 612 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 POLHQ9Y253 713 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 PCDHGA6Q9Y5G7 932 aa14.61□□□□□ -0.07
MSH5-208ENST00000429846 DNMT3AQ9Y6K1 912 aaPredicted RBP14.61□□□□□ -0.07
MSH5-208ENST00000429846 NAV2Q8IVL1 2488 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 GLYATL1P3A0A0U1RQE8 302 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 KLHL33A6NCF5 533 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 CST8O60676 142 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 CCNYL3P0C7X3 344 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 ZNF28P17035 718 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 COMTP21964 271 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 F8A1P23610 371 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 MPP3Q13368 585 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 SLC1A5Q15758 541 aa14.6□□□□□ -0.07
MSH5-208ENST00000429846 SKIDA1Q1XH10 827 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms