RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 FPGTO14772 594 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 POLR2EP19388 210 aaKnown RBP14.36□□□□□ -0.11
PTPRU-204ENST00000428026 TLX1P31314 330 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-204ENST00000428026 BNIP3Q12983 259 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 ZNHIT3Q15649 155 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-204ENST00000428026 RAET1GQ6H3X3 334 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 FCRL2Q96LA5 508 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-204ENST00000428026 NXF3Q9H4D5 531 aaKnown RBP14.36□□□□□ -0.11
PTPRU-204ENST00000428026 SMIM35A0A1B0GVV1 85 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 TBL1XO60907 577 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 ARF4P18085 180 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-204ENST00000428026 APLP1P51693 650 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 VSTM1Q6UX27 236 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 BANPQ8N9N5 519 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 OR10A6Q8NH74 314 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 GPN1Q9HCN4 374 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-204ENST00000428026 EQTNQ9NQ60 294 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 A0A088AWK7 358 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 ZNF10P21506 573 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-204ENST00000428026 RPL3P39023 403 aaKnown RBP14.36□□□□□ -0.11
PTPRU-204ENST00000428026 CEBPGP53567 150 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 UBE2R2Q712K3 238 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-204ENST00000428026 MON1BQ7L1V2 547 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 IQCF2Q8IXL9 164 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 CCDC36Q8IYA8 594 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 C18orf25Q96B23 403 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-204ENST00000428026 HSPBAP1Q96EW2 488 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 CCDC115Q96NT0 180 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 TRNT1Q96Q11 434 aaKnown RBP14.36□□□□□ -0.11
PTPRU-204ENST00000428026 C11orf16Q9NQ32 467 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 IFT80Q9P2H3 777 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-204ENST00000428026 AGO1Q9UL18 857 aaKnown RBP14.36□□□□□ -0.11
PTPRU-204ENST00000428026 PCDHGC3Q9UN70 934 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 LRP6O75581 1613 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 CKMT2P17540 419 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 KIR3DL1P43629 444 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 PSEN1P49768 467 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 PHC1P78364 1004 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 TTC29Q8NA56 475 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-204ENST00000428026 LEMD2Q8NC56 503 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 CERS4Q9HA82 394 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 AASDHPPTQ9NRN7 309 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 CIDEBQ9UHD4 219 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 ZNF214Q9UL59 606 aaPredicted RBP14.36□□□□□ -0.11
PTPRU-204ENST00000428026 TESMINQ9Y4I5 508 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 MAP4K5Q9Y4K4 846 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 H3BSA7 217 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 MSI1O43347 362 aaKnown RBP14.36□□□□□ -0.11
PTPRU-204ENST00000428026 UGT1A9O60656 530 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 SCGNO76038 276 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 GPIP06744 558 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 CXCR2P25025 360 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 FMO3P31513 532 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 E2F2Q14209 437 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 TNFAIP8L3Q5GJ75 292 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 FSTL4Q6MZW2 842 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 TRPV3Q8NET8 790 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 CORO1BQ9BR76 489 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 CHIAQ9BZP6 476 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 UGT1A7Q9HAW7 530 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 UGT1A10Q9HAW8 530 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 UGT1A8Q9HAW9 530 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 SLC27A5Q9Y2P5 690 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 PEX16Q9Y5Y5 336 aa14.36□□□□□ -0.11
PTPRU-204ENST00000428026 UGT1A6P19224 532 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 EFNA1P20827 205 aaPredicted RBP14.35□□□□□ -0.11
PTPRU-204ENST00000428026 UGT1A1P22309 533 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 UGT1A4P22310 534 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 PRDX6P30041 224 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 UGT1A3P35503 534 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 UGT1A5P35504 534 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 MNDAP41218 407 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 GDF10P55107 478 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 WDR4P57081 412 aaKnown RBP14.35□□□□□ -0.11
PTPRU-204ENST00000428026 TOMM20Q15388 145 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 ZBTB6Q15916 424 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 TEX44Q53QW1 395 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 COLEC12Q5KU26 742 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 NKD2Q969F2 451 aaPredicted RBP14.35□□□□□ -0.11
PTPRU-204ENST00000428026 SGK2Q9HBY8 427 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 C12orf4Q9NQ89 552 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 PPM1HQ9ULR3 514 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 KCNE2Q9Y6J6 123 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 J3QRK9 145 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 FGBP02675 491 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 LIMK2P53671 638 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 SNRPD1P62314 119 aaKnown RBP14.35□□□□□ -0.11
PTPRU-204ENST00000428026 SLC9B1Q4ZJI4 515 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 ANO7Q6IWH7 933 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 ING5Q8WYH8 240 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 FBXL8Q96CD0 374 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 C12orf42Q96LP6 360 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 C1QTNF1Q9BXJ1 281 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 KAT8Q9H7Z6 458 aaKnown RBP14.35□□□□□ -0.11
PTPRU-204ENST00000428026 SNTG1Q9NSN8 517 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 GIT1Q9Y2X7 761 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 ZNF536O15090 1300 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.35□□□□□ -0.11
PTPRU-204ENST00000428026 EI24O14681 340 aa14.35□□□□□ -0.11
PTPRU-204ENST00000428026 OR10H2O60403 315 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms