RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 HMGB4Q8WW32 186 aa16.9■□□□□ 0.3
CHEK1-202ENST00000427383 DCUN1D1Q96GG9 259 aa16.9■□□□□ 0.3
CHEK1-202ENST00000427383 PDLIM5Q96HC4 596 aaKnown RBP16.9■□□□□ 0.3
CHEK1-202ENST00000427383 COX14Q96I36 57 aa16.9■□□□□ 0.3
CHEK1-202ENST00000427383 PANX3Q96QZ0 392 aa16.9■□□□□ 0.3
CHEK1-202ENST00000427383 NELL2Q99435 816 aa16.9■□□□□ 0.3
CHEK1-202ENST00000427383 OSBPL6Q9BZF3 934 aa16.9■□□□□ 0.3
CHEK1-202ENST00000427383 POLMQ9NP87 494 aaPredicted RBP16.9■□□□□ 0.3
CHEK1-202ENST00000427383 SPATS2LQ9NUQ6 558 aaKnown RBP16.9■□□□□ 0.3
CHEK1-202ENST00000427383 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.9■□□□□ 0.3
CHEK1-202ENST00000427383 KLHL42Q9P2K6 505 aa16.9■□□□□ 0.3
CHEK1-202ENST00000427383 EBF1Q9UH73 591 aa16.9■□□□□ 0.3
CHEK1-202ENST00000427383 MID2Q9UJV3 735 aa16.9■□□□□ 0.3
CHEK1-202ENST00000427383 IKZF3Q9UKT9 509 aa16.9■□□□□ 0.3
CHEK1-202ENST00000427383 FAM170BA6NMN3 283 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 RNGTTO60942 597 aaKnown RBP16.89■□□□□ 0.29
CHEK1-202ENST00000427383 RALBP11234 206 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 FGF3P11487 239 aaPredicted RBP16.89■□□□□ 0.29
CHEK1-202ENST00000427383 MSH3P20585 1137 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 DRD4P21917 467 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 TEAD1P28347 426 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 ATP6V0D1P61421 351 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 PPP2CBP62714 309 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 PPP2CAP67775 309 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 TMEM115Q12893 351 aaPredicted RBP16.89■□□□□ 0.29
CHEK1-202ENST00000427383 ZNF648Q5T619 568 aaPredicted RBP16.89■□□□□ 0.29
CHEK1-202ENST00000427383 PNCKQ6P2M8 343 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 NUDCD3Q8IVD9 361 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 C10orf107Q8IVU9 208 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 RASGEF1AQ8N9B8 481 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 FLCNQ8NFG4 579 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 RHEBL1Q8TAI7 183 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 EEF1AKMT1Q8WVE0 214 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 INPP5DQ92835 1189 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 SGF29Q96ES7 293 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 ALG9Q9H6U8 611 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 MANSC1Q9H8J5 431 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 SARS2Q9NP81 518 aaKnown RBP16.89■□□□□ 0.29
CHEK1-202ENST00000427383 ITM2CQ9NQX7 267 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 NCKAP1Q9Y2A7 1128 aa16.89■□□□□ 0.29
CHEK1-202ENST00000427383 QSOX1O00391 747 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 MAGEC1O60732 1142 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 TRIM16O95361 564 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 FAM107AO95990 144 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 RBP1P09455 135 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 ITGB6P18564 788 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 CCR7P32248 378 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 ACSL1P33121 698 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 PRLHRP49683 370 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 CTSCP53634 463 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 IL2P60568 153 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 IRF4Q15306 451 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 OR4D1Q15615 310 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 CHI3L2Q15782 390 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 DET1Q7L5Y6 550 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 TRIM74Q86UV6 250 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 ZBTB2Q8N680 514 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 PJA1Q8NG27 643 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 ASB12Q8WXK4 309 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 KIAA1191Q96A73 305 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 LINGO1Q96FE5 620 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 SCYL1Q96KG9 808 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 LENG8Q96PV6 779 aaPredicted RBP16.88■□□□□ 0.29
CHEK1-202ENST00000427383 ATOH8Q96SQ7 321 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 SLC17A9Q9BYT1 436 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 TFB2MQ9H5Q4 396 aaKnown RBP16.88■□□□□ 0.29
CHEK1-202ENST00000427383 EPHX3Q9H6B9 360 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 TBC1D17Q9HA65 648 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 SLCO1B3Q9NPD5 702 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 MBNL1Q9NR56 388 aaKnown RBP16.88■□□□□ 0.29
CHEK1-202ENST00000427383 OXSMQ9NWU1 459 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 CCDC189A1A4V9 331 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 LILRB5O75023 590 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 ATG13O75143 517 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 PAK4O96013 591 aaPredicted RBP16.88■□□□□ 0.29
CHEK1-202ENST00000427383 PCCBP05166 539 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 MYL2P10916 166 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 AOAHP28039 575 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 TRIM23P36406 574 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 KCNC1P48547 511 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 OTOAQ7RTW8 1153 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 ADGRG6Q86SQ4 1221 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 FAM124AQ86V42 546 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 TRIM69Q86WT6 500 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 HEATR4Q86WZ0 1026 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 FUBP1Q96AE4 644 aaKnown RBP16.88■□□□□ 0.29
CHEK1-202ENST00000427383 CLDN23Q96B33 292 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 HIC2Q96JB3 615 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 CCT8L2Q96SF2 557 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 TEX101Q9BY14 249 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 CD320Q9NPF0 282 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 FGFR1OP2Q9NVK5 253 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 MUTYHQ9UIF7 546 aa16.88■□□□□ 0.29
CHEK1-202ENST00000427383 A0A0C4DFX4 3053 aa16.87■□□□□ 0.29
CHEK1-202ENST00000427383 TBC1D3DA0A087WVF3 549 aa16.87■□□□□ 0.29
CHEK1-202ENST00000427383 TBC1D3IA0A087WXS9 549 aa16.87■□□□□ 0.29
CHEK1-202ENST00000427383 TBC1D3EA0A087X179 549 aa16.87■□□□□ 0.29
CHEK1-202ENST00000427383 TBC1D3KA0A087X1G2 549 aa16.87■□□□□ 0.29
CHEK1-202ENST00000427383 TBC1D3FA6NER0 549 aaPredicted RBP16.87■□□□□ 0.29
CHEK1-202ENST00000427383 PRR23AA6NEV1 266 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms