RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 ZNF479Q96JC4 524 aa5.13□□□□□ -1.59
LINC00458-202ENST00000427299 IFT74Q96LB3 600 aa5.13□□□□□ -1.59
LINC00458-202ENST00000427299 CCDC114Q96M63 670 aa5.13□□□□□ -1.59
LINC00458-202ENST00000427299 TRAPPC9Q96Q05 1148 aa5.13□□□□□ -1.59
LINC00458-202ENST00000427299 SERINC2Q96SA4 455 aa5.13□□□□□ -1.59
LINC00458-202ENST00000427299 MECRQ9BV79 373 aa5.13□□□□□ -1.59
LINC00458-202ENST00000427299 TEKT3Q9BXF9 490 aa5.13□□□□□ -1.59
LINC00458-202ENST00000427299 MOV10L1Q9BXT6 1211 aaKnown RBP5.13□□□□□ -1.59
LINC00458-202ENST00000427299 INTS2Q9H0H0 1204 aaKnown RBP5.13□□□□□ -1.59
LINC00458-202ENST00000427299 CPVLQ9H3G5 476 aa5.13□□□□□ -1.59
LINC00458-202ENST00000427299 CCDC134Q9H6E4 229 aa5.13□□□□□ -1.59
LINC00458-202ENST00000427299 MLXIPLQ9NP71 852 aa5.13□□□□□ -1.59
LINC00458-202ENST00000427299 HOMER3Q9NSC5 361 aa5.13□□□□□ -1.59
LINC00458-202ENST00000427299 SEPT11Q9NVA2 429 aaKnown RBP5.13□□□□□ -1.59
LINC00458-202ENST00000427299 TBC1D7Q9P0N9 293 aa5.13□□□□□ -1.59
LINC00458-202ENST00000427299 SEMA5BQ9P283 1151 aa5.13□□□□□ -1.59
LINC00458-202ENST00000427299 UVRAGQ9P2Y5 699 aa5.13□□□□□ -1.59
LINC00458-202ENST00000427299 PACSIN2Q9UNF0 486 aaPredicted RBP5.13□□□□□ -1.59
LINC00458-202ENST00000427299 AFF2P51816 1311 aa5.13□□□□□ -1.59
LINC00458-202ENST00000427299 COL11A1P12107 1806 aaPredicted RBP5.13□□□□□ -1.59
LINC00458-202ENST00000427299 SMCHD1A6NHR9 2005 aa5.13□□□□□ -1.59
LINC00458-202ENST00000427299 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.12□□□□□ -1.59
LINC00458-202ENST00000427299 ARHGEF35A5YM69 484 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 ZSCAN5CA6NGD5 496 aaPredicted RBP5.12□□□□□ -1.59
LINC00458-202ENST00000427299 HMX3A6NHT5 357 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 A6NLC8 198 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 B4E171 279 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 ZNF814B7Z6K7 855 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 K7ENM7 598 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 ASAP2O43150 1006 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 TTI1O43156 1089 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 TLX3O43711 291 aaPredicted RBP5.12□□□□□ -1.59
LINC00458-202ENST00000427299 KIF1CO43896 1103 aaKnown RBP5.12□□□□□ -1.59
LINC00458-202ENST00000427299 AKAP3O75969 853 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 MTA2O94776 668 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 EPN2O95208 641 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 GAS8O95995 478 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 TK1P04183 234 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 CD63P08962 238 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 TGFB3P10600 412 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 CTNNA2P26232 953 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 AKT1P31749 480 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 HNRNPH1P31943 449 aaKnown RBP5.12□□□□□ -1.59
LINC00458-202ENST00000427299 TSPAN7P41732 249 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 MXI1P50539 228 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 TUBP50607 506 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 STAT2P52630 851 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 PMS2P54278 862 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 GALCP54803 685 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 POU5F1Q01860 360 aaKnown RBP5.12□□□□□ -1.59
LINC00458-202ENST00000427299 SEMA3BQ13214 749 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 PRPF4BQ13523 1007 aaKnown RBP5.12□□□□□ -1.59
LINC00458-202ENST00000427299 UAP1Q16222 522 aaPredicted RBP5.12□□□□□ -1.59
LINC00458-202ENST00000427299 LACTB2Q53H82 288 aaPredicted RBP5.12□□□□□ -1.59
LINC00458-202ENST00000427299 KIAA1755Q5JYT7 1200 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 TRMT10CQ7L0Y3 403 aaKnown RBP5.12□□□□□ -1.59
LINC00458-202ENST00000427299 ENOSF1Q7L5Y1 443 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 HEATR4Q86WZ0 1026 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 CATSPER3Q86XQ3 398 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 CPOQ8IVL8 374 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 C12orf56Q8IXR9 622 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 BBOF1Q8ND07 529 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 DYDC1Q8WWB3 177 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 CRYGNQ8WXF5 182 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 NPIPB3Q92617 1050 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 KIFAP3Q92845 792 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 SLCO2A1Q92959 643 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 TLCD1Q96CP7 247 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 TRMT61AQ96FX7 289 aaKnown RBP5.12□□□□□ -1.59
LINC00458-202ENST00000427299 ANKRD27Q96NW4 1050 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 XPO6Q96QU8 1125 aaKnown RBP5.12□□□□□ -1.59
LINC00458-202ENST00000427299 SELENOSQ9BQE4 189 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 ERP44Q9BS26 406 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 TMEM109Q9BVC6 243 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 SCNM1Q9BWG6 230 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 ROPN1BQ9BZX4 212 aaPredicted RBP5.12□□□□□ -1.59
LINC00458-202ENST00000427299 SAP30LQ9HAJ7 183 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 ROPN1Q9HAT0 212 aaPredicted RBP5.12□□□□□ -1.59
LINC00458-202ENST00000427299 SIX2Q9NPC8 291 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 PPANQ9NQ55 473 aaKnown RBP5.12□□□□□ -1.59
LINC00458-202ENST00000427299 TBC1D22BQ9NU19 505 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 TMOD2Q9NZR1 351 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 LARSQ9P2J5 1176 aaKnown RBP5.12□□□□□ -1.59
LINC00458-202ENST00000427299 PCYOX1Q9UHG3 505 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 AMACRQ9UHK6 382 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 FAM153AQ9UHL3 310 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 CNOT7Q9UIV1 285 aaKnown RBP5.12□□□□□ -1.59
LINC00458-202ENST00000427299 SLC13A4Q9UKG4 626 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 EXOC7Q9UPT5 735 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 ADGRA3Q8IWK6 1321 aa5.12□□□□□ -1.59
LINC00458-202ENST00000427299 TNS1Q9HBL0 1735 aaKnown RBP5.11□□□□□ -1.59
LINC00458-202ENST00000427299 RALGAPA2Q2PPJ7 1873 aa5.11□□□□□ -1.59
LINC00458-202ENST00000427299 SLC38A8A6NNN8 435 aa5.11□□□□□ -1.59
LINC00458-202ENST00000427299 H0YGN5 161 aa5.11□□□□□ -1.59
LINC00458-202ENST00000427299 HOXC11O43248 304 aaPredicted RBP5.11□□□□□ -1.59
LINC00458-202ENST00000427299 SPOPO43791 374 aa5.11□□□□□ -1.59
LINC00458-202ENST00000427299 PRAMEF2O60811 474 aa5.11□□□□□ -1.59
LINC00458-202ENST00000427299 RTN2O75298 545 aa5.11□□□□□ -1.59
LINC00458-202ENST00000427299 LUC7L3O95232 432 aaKnown RBP5.11□□□□□ -1.59
LINC00458-202ENST00000427299 TBX18O95935 607 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms