RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 CCNCP24863 283 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 TNFRSF8P28908 595 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 SSR1P43307 286 aaKnown RBP14.37□□□□□ -0.11
PDAP1-202ENST00000426447 PPP1CAP62136 330 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 HSD11B2P80365 405 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 NIPAL4Q0D2K0 466 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 ELOAQ14241 798 aaKnown RBP14.37□□□□□ -0.11
PDAP1-202ENST00000426447 NR6A1Q15406 480 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 IFI16Q16666 785 aaKnown RBP14.37□□□□□ -0.11
PDAP1-202ENST00000426447 SLC6A19Q695T7 634 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 TXNRD3NBQ6F5E7 133 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 WASH2PQ6VEQ5 465 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 TRAM1L1Q8N609 369 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 GPR26Q8NDV2 337 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 TEKT4Q8WW24 435 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 MAML1Q92585 1016 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 C19orf60Q96EN9 201 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 TRIM11Q96F44 468 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 MAP3K3Q99759 626 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 SYT11Q9BT88 431 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 NUDT9Q9BW91 350 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 HAUS4Q9H6D7 363 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 RAD18Q9NS91 495 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 KCND1Q9NSA2 647 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 SHOC2Q9UQ13 582 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 CACNA1DQ01668 2161 aa14.37□□□□□ -0.11
PDAP1-202ENST00000426447 SSU72P8A0A1W2PR75 194 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 MFSD11O43934 449 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 CEACAM4O75871 244 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 JCHAINP01591 159 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 HLA-DQB2P05538 268 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 MYBL1P10243 752 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 CD86P42081 329 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 GALNT2Q10471 571 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 MMRN1Q13201 1228 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 GTF2H3Q13889 308 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 GALNT3Q14435 633 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 PIGHQ14442 188 aaPredicted RBP14.36□□□□□ -0.11
PDAP1-202ENST00000426447 PLCL1Q15111 1095 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 ASIC2Q16515 512 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 DNTTIP2Q5QJE6 756 aaKnown RBP14.36□□□□□ -0.11
PDAP1-202ENST00000426447 TMTC4Q5T4D3 741 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 AGAP9Q5VTM2 703 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 IZUMO3Q5VZ72 239 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 PDPK2PQ6A1A2 396 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 CERS6Q6ZMG9 384 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 KMT5CQ86Y97 462 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 TICAM1Q8IUC6 712 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 IQCKQ8N0W5 287 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 RBMXL3Q8N7X1 1067 aaKnown RBP14.36□□□□□ -0.11
PDAP1-202ENST00000426447 TTC13Q8NBP0 860 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 CCNYQ8ND76 341 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 GDAP1Q8TB36 358 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 TTC25Q96NG3 672 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 NUP85Q9BW27 656 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 CHST8Q9H2A9 424 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 GPR83Q9NYM4 423 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 SEMA5BQ9P283 1151 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 ESPL1Q14674 2120 aa14.36□□□□□ -0.11
PDAP1-202ENST00000426447 CBX6O95503 412 aa14.35□□□□□ -0.11
PDAP1-202ENST00000426447 FECHP22830 423 aa14.35□□□□□ -0.11
PDAP1-202ENST00000426447 ELAVL4P26378 380 aaKnown RBP14.35□□□□□ -0.11
PDAP1-202ENST00000426447 RRADP55042 308 aa14.35□□□□□ -0.11
PDAP1-202ENST00000426447 GSDMDP57764 484 aa14.35□□□□□ -0.11
PDAP1-202ENST00000426447 TUBB4BP68371 445 aa14.35□□□□□ -0.11
PDAP1-202ENST00000426447 GPS2Q13227 327 aa14.35□□□□□ -0.11
PDAP1-202ENST00000426447 RAPSNQ13702 412 aa14.35□□□□□ -0.11
PDAP1-202ENST00000426447 TUBB2AQ13885 445 aa14.35□□□□□ -0.11
PDAP1-202ENST00000426447 KYNUQ16719 465 aa14.35□□□□□ -0.11
PDAP1-202ENST00000426447 ZRANB3Q5FWF4 1079 aa14.35□□□□□ -0.11
PDAP1-202ENST00000426447 MED25Q71SY5 747 aa14.35□□□□□ -0.11
PDAP1-202ENST00000426447 TRAPPC5Q8IUR0 188 aa14.35□□□□□ -0.11
PDAP1-202ENST00000426447 CISD2Q8N5K1 135 aaKnown RBP14.35□□□□□ -0.11
PDAP1-202ENST00000426447 ENDOVQ8N8Q3 282 aaKnown RBP14.35□□□□□ -0.11
PDAP1-202ENST00000426447 TMEM102Q8N9M5 508 aaPredicted RBP14.35□□□□□ -0.11
PDAP1-202ENST00000426447 LRRN4Q8WUT4 740 aa14.35□□□□□ -0.11
PDAP1-202ENST00000426447 EID2BQ96D98 161 aa14.35□□□□□ -0.11
PDAP1-202ENST00000426447 SNRNP40Q96DI7 357 aaKnown RBP14.35□□□□□ -0.11
PDAP1-202ENST00000426447 TUBB2BQ9BVA1 445 aa14.35□□□□□ -0.11
PDAP1-202ENST00000426447 GPR63Q9BZJ6 419 aa14.35□□□□□ -0.11
PDAP1-202ENST00000426447 ASF1BQ9NVP2 202 aa14.35□□□□□ -0.11
PDAP1-202ENST00000426447 MYO6Q9UM54 1294 aa14.35□□□□□ -0.11
PDAP1-202ENST00000426447 WDR37Q9Y2I8 494 aa14.35□□□□□ -0.11
PDAP1-202ENST00000426447 RP1L1Q8IWN7 2480 aaPredicted RBP14.35□□□□□ -0.11
PDAP1-202ENST00000426447 ANKUB1A6NFN9 424 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 LRRC10BA6NIK2 292 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 LRRC53A6NM62 1247 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 PIRTP0C851 137 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 VAV2P52735 878 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 DCDC1P59894 354 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 LAMB3Q13751 1172 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 PAFAH1B3Q15102 231 aaKnown RBP14.34□□□□□ -0.11
PDAP1-202ENST00000426447 GPR19Q15760 415 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 PLEKHN1Q494U1 663 aaPredicted RBP14.34□□□□□ -0.11
PDAP1-202ENST00000426447 C1QL3Q5VWW1 255 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 NCBP2-AS2Q69YL0 99 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 ARMC6Q6NXE6 501 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 ZNF571Q7Z3V5 609 aaPredicted RBP14.34□□□□□ -0.11
PDAP1-202ENST00000426447 ZNF547Q8IVP9 402 aa14.34□□□□□ -0.11
PDAP1-202ENST00000426447 D2HGDHQ8N465 521 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms