RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 RABIFP47224 123 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 CTSCP53634 463 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 C21orf59P57076 290 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 GPX6P59796 221 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 SRP54P61011 504 aaKnown RBP5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 YPEL5P62699 121 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 PDE1BQ01064 536 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 IL9RQ01113 521 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 CACNG1Q06432 222 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 BNIP3Q12983 259 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 NFATC2Q13469 925 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 LAMB3Q13751 1172 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 CRYMQ14894 314 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 TEAD4Q15561 434 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 ERCC6LQ2NKX8 1250 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 ALG11Q2TAA5 492 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 HLA-BQ31612 363 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 ZRANB3Q5FWF4 1079 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 ZNF789Q5FWF6 425 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 GPRC6AQ5T6X5 926 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 STEAP4Q687X5 459 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 KIAA0930Q6ICG6 404 aaPredicted RBP5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 TRMT10BQ6PF06 316 aaKnown RBP5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 AFTPHQ6ULP2 937 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 MACC1Q6ZN28 852 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 CAPN12Q6ZSI9 719 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 MARK2Q7KZI7 788 aaKnown RBP5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 DET1Q7L5Y6 550 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 NLRP9Q7RTR0 991 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 TAS2R42Q7RTR8 314 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 SNX20Q7Z614 316 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 TMEM135Q86UB9 458 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 IQCHQ86VS3 1027 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 SERPINA9Q86WD7 417 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 CCDC25Q86WR0 208 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 IFT20Q8IY31 132 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 RAVER1Q8IY67 606 aaKnown RBP5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 ZBED8Q8IZ13 594 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 RBFAQ8N0V3 343 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 PDIK1LQ8N165 341 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 NXPE1Q8N323 547 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 RASGEF1AQ8N9B8 481 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 OR6P1Q8NGX9 317 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 OR4L1Q8NH43 312 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 CCL4L1Q8NHW4 92 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 CEP76Q8TAP6 659 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 DTX3LQ8TDB6 740 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 GLYATL1Q969I3 302 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 PDXPQ96GD0 296 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 C9orf72Q96LT7 481 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 WDR92Q96MX6 357 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 VPS35Q96QK1 796 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 ZSCAN5AQ9BUG6 496 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 GTPBP2Q9BX10 602 aaKnown RBP5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 CDH19Q9H159 772 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 ASB8Q9H765 288 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 ZFP64Q9NPA5 681 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 PHPT1Q9NRX4 125 aaPredicted RBP5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 RAD18Q9NS91 495 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 TM7SF3Q9NS93 570 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 SEMA4GQ9NTN9 838 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 UCKL1Q9NWZ5 548 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 KCTD5Q9NXV2 234 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 SCHIP1Q9P0W5 487 aaPredicted RBP5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 SAMD15Q9P1V8 674 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 ATXN10Q9UBB4 475 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 NCDNQ9UBB6 729 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 ZC3H7BQ9UGR2 993 aaKnown RBP5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 SUSD2Q9UGT4 822 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 GMEB2Q9UKD1 530 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 APPL1Q9UKG1 709 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 ST14Q9Y5Y6 855 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 PRSS21Q9Y6M0 314 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 RPS6KL1Q9Y6S9 549 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 FAM169AQ9Y6X4 670 aa5.65□□□□□ -1.5
HERPUD2-204ENST00000426180 LRRK1Q38SD2 2015 aa5.65□□□□□ -1.51
HERPUD2-204ENST00000426180 FANCMQ8IYD8 2048 aa5.65□□□□□ -1.51
HERPUD2-204ENST00000426180 VPS13AQ96RL7 3174 aa5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 LNP1A1A4G5 178 aa5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 PRSS38A1L453 326 aa5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 MAGEB16A2A368 324 aa5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 CXorf49A8MYA2 514 aaPredicted RBP5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 CACNB4O00305 520 aaPredicted RBP5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 CDX4O14627 284 aaPredicted RBP5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 CD3EAPO15446 510 aaKnown RBP5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 SGTAO43765 313 aa5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 SDC3O75056 442 aa5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 DNAJC6O75061 913 aa5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 USP1O94782 785 aa5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 ASMTLO95671 621 aa5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 POLBP06746 335 aa5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 ITGALP20701 1170 aa5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 ACRV1P26436 265 aa5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 SSTR1P30872 391 aa5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 SOX11P35716 441 aa5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 HADHAP40939 763 aa5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 DPP6P42658 865 aa5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 MAGEA4P43358 317 aa5.64□□□□□ -1.51
HERPUD2-204ENST00000426180 ABCG1P45844 678 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms