RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 STN1Q9H668 368 aaKnown RBP12.56□□□□□ -0.4
SGCE-203ENST00000425444 HACD3Q9P035 362 aa12.56□□□□□ -0.4
SGCE-203ENST00000425444 FOXJ2Q9P0K8 574 aa12.56□□□□□ -0.4
SGCE-203ENST00000425444 ATXN10Q9UBB4 475 aa12.56□□□□□ -0.4
SGCE-203ENST00000425444 NFKBIL1Q9UBC1 381 aaPredicted RBP12.56□□□□□ -0.4
SGCE-203ENST00000425444 PACSIN2Q9UNF0 486 aaPredicted RBP12.56□□□□□ -0.4
SGCE-203ENST00000425444 KCNK6Q9Y257 313 aa12.56□□□□□ -0.4
SGCE-203ENST00000425444 PCYT1BQ9Y5K3 369 aaPredicted RBP12.56□□□□□ -0.4
SGCE-203ENST00000425444 TRBV23OR9-2A0A075B6M9 112 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 A1L4Q6 167 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 NUAK1O60285 661 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 ANXA9O76027 345 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 CPNE6O95741 557 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 EPOP01588 193 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 ZNF8P17098 575 aaPredicted RBP12.55□□□□□ -0.4
SGCE-203ENST00000425444 ELAVL4P26378 380 aaKnown RBP12.55□□□□□ -0.4
SGCE-203ENST00000425444 CCKBRP32239 447 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 CD97P48960 835 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 MAPK10P53779 464 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 OR1D5P58170 312 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 PRPSAP1Q14558 356 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 SLC1A5Q15758 541 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 INSCQ1MX18 579 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 PLA2G4EQ3MJ16 856 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 ZNF648Q5T619 568 aaPredicted RBP12.55□□□□□ -0.4
SGCE-203ENST00000425444 FHL5Q5TD97 284 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 ZDHHC20Q5W0Z9 365 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 ZNF787Q6DD87 383 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 CRTC3Q6UUV7 619 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 C17orf82Q86X59 251 aaPredicted RBP12.55□□□□□ -0.4
SGCE-203ENST00000425444 GDAP1Q8TB36 358 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 SSC4DQ8WTU2 575 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 USP7Q93009 1102 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 LRRC45Q96CN5 670 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 PLEKHG4BQ96PX9 1271 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 FICDQ9BVA6 458 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 OSGEPL1Q9H4B0 414 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 RDH14Q9HBH5 336 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 TRIM39Q9HCM9 518 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 AAR2Q9Y312 384 aaKnown RBP12.55□□□□□ -0.4
SGCE-203ENST00000425444 PKP3Q9Y446 797 aa12.55□□□□□ -0.4
SGCE-203ENST00000425444 A0A0U1RQJ8 604 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 B4GAT1O43505 415 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 MTX2O75431 263 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 ZNF189O75820 626 aaPredicted RBP12.54□□□□□ -0.4
SGCE-203ENST00000425444 SLC2A4P14672 509 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 PSMB4P28070 264 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 HMGCLP35914 325 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 SPAM1P38567 509 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 ETV5P41161 510 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 GPR3P46089 330 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 GSDMDP57764 484 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 B4GALNT1Q00973 533 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 GTF2H3Q13889 308 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 NR1D2Q14995 579 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 ANKRD20A2Q5SQ80 823 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 ANKRD20A1Q5TYW2 823 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 ANKRD20A3Q5VUR7 823 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 FAM151BQ6UXP7 276 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 ZNF438Q7Z4V0 828 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 PIM3Q86V86 326 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 TTC13Q8NBP0 860 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 SLC37A2Q8TED4 501 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 SLC38A3Q99624 504 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 TSGA10Q9BZW7 698 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 AKAP7Q9P0M2 348 aaPredicted RBP12.54□□□□□ -0.4
SGCE-203ENST00000425444 CAPN6Q9Y6Q1 641 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 SDK2Q58EX2 2172 aa12.54□□□□□ -0.4
SGCE-203ENST00000425444 HIVEP1P15822 2718 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 GLYATL1P3A0A0U1RQE8 302 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 GPR89AB7ZAQ6 455 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 C9orf172C9J069 976 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 PPM1DO15297 605 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 DDX3YO15523 660 aaKnown RBP12.53□□□□□ -0.4
SGCE-203ENST00000425444 BUD23O43709 281 aaKnown RBP12.53□□□□□ -0.4
SGCE-203ENST00000425444 VEGFDO43915 354 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 CDK14O94921 469 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 EML2O95834 649 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 AGTP01019 485 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 GPR89BP0CG08 455 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 CD82P27701 267 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 TNFRSF8P28908 595 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 UQCRFS1P47985 274 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 MLLT10P55197 1068 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 HHEXQ03014 270 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 NFATC2Q13469 925 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 ATP13A5Q4VNC0 1218 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 ARHGEF18Q6ZSZ5 1173 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 ADGRG6Q86SQ4 1221 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 LRRTM4Q86VH4 590 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 ZNF761Q86XN6 746 aaPredicted RBP12.53□□□□□ -0.4
SGCE-203ENST00000425444 TRAPPC5Q8IUR0 188 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 SFRP1Q8N474 314 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 TTC30BQ8N4P2 665 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 CCDC110Q8TBZ0 833 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 TMEM159Q96B96 161 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 AHCYL2Q96HN2 611 aaKnown RBP12.53□□□□□ -0.4
SGCE-203ENST00000425444 SPATA13Q96N96 652 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 TTC25Q96NG3 672 aa12.53□□□□□ -0.4
SGCE-203ENST00000425444 PPP1R2P1Q96PQ5 205 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms