RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 ARHGAP9Q9BRR9 750 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 ASPSCR1Q9BZE9 553 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 GPR63Q9BZJ6 419 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 FAM117AQ9C073 453 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 SLC25A18Q9H1K4 315 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 CARD9Q9H257 536 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 PRDM8Q9NQV8 689 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 ZNF624Q9P2J8 865 aaPredicted RBP12.79□□□□□ -0.36
VRK3-203ENST00000424804 NFKBIL1Q9UBC1 381 aaPredicted RBP12.79□□□□□ -0.36
VRK3-203ENST00000424804 TMEM184BQ9Y519 407 aaPredicted RBP12.79□□□□□ -0.36
VRK3-203ENST00000424804 SLC30A1Q9Y6M5 507 aa12.79□□□□□ -0.36
VRK3-203ENST00000424804 NBPF19A0A087WUL8 3843 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 DLGAP3O95886 979 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 C9P02748 559 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 F3P13726 295 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 BRAFP15056 766 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 CA5AP35218 305 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 PTPN7P35236 360 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 SLC19A1P41440 591 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 ATP1A2P50993 1020 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 EPHA4P54764 986 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 SNAP47Q5SQN1 464 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 DCAF12Q5T6F0 453 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 ALS2CLQ60I27 953 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 C11orf96Q7Z7L8 435 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 FAM129CQ86XR2 697 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 OR10G6Q8NH81 332 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 NCSTNQ92542 709 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 FSD1LQ9BXM9 530 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 TRIM39Q9HCM9 518 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 PKD2L2Q9NZM6 624 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 CPNE7Q9UBL6 633 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 FAM153AQ9UHL3 310 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 EFR3BQ9Y2G0 817 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 MN1Q10571 1320 aaPredicted RBP12.78□□□□□ -0.36
VRK3-203ENST00000424804 DOPEY2Q9Y3R5 2298 aa12.78□□□□□ -0.36
VRK3-203ENST00000424804 KIR2DS5A0A0G2JLQ3 304 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 A0A0G2JNG1 304 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 LILRA5A6NI73 299 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 KIR2DS3K7RE56 304 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 AURKAO14965 403 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 SNX2O60749 519 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 NDST3O95803 873 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 SFTPCP11686 197 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 BPIP17213 487 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 XRCC1P18887 633 aaPredicted RBP12.77□□□□□ -0.37
VRK3-203ENST00000424804 F8A1P23610 371 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 CHRNA4P43681 627 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 GFERP55789 205 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 WNT3AP56704 352 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 RAB15P59190 212 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 DCDC1P59894 354 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 BIRC2Q13490 618 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 KIR2DS5Q14953 304 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 RPS6KA1Q15418 735 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 ITPRIPL1Q6GPH6 555 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 BORAQ6PGQ7 559 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 ATG14Q6ZNE5 492 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 SLC9B2Q86UD5 537 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 UNC5BQ8IZJ1 945 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 TAB3Q8N5C8 712 aaPredicted RBP12.77□□□□□ -0.37
VRK3-203ENST00000424804 IL22RA1Q8N6P7 574 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 TTC13Q8NBP0 860 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 CCDC110Q8TBZ0 833 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 AHCYL2Q96HN2 611 aaKnown RBP12.77□□□□□ -0.37
VRK3-203ENST00000424804 HES6Q96HZ4 224 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 TEFMQ96QE5 360 aaKnown RBP12.77□□□□□ -0.37
VRK3-203ENST00000424804 VAT1Q99536 393 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 FICDQ9BVA6 458 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 OR2AG1Q9H205 316 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 ADNPQ9H2P0 1102 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 UCK1Q9HA47 277 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 ZFYVE1Q9HBF4 777 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 MAGEE1Q9HCI5 957 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 KLC4Q9NSK0 619 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 TRHDEQ9UKU6 1024 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 PPP2R2CQ9Y2T4 447 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 ZNF711Q9Y462 761 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 SPO11Q9Y5K1 396 aa12.77□□□□□ -0.37
VRK3-203ENST00000424804 TCRBV7S2A1N4TA0A589 114 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 PPFIA2O75334 1257 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 ANKRD34CP0C6C1 535 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 ZNF28P17035 718 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 MAP4P27816 1152 aaKnown RBP12.76□□□□□ -0.37
VRK3-203ENST00000424804 PSMB4P28070 264 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 OAS2P29728 719 aaKnown RBP12.76□□□□□ -0.37
VRK3-203ENST00000424804 POLE2P56282 527 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 ABHD18Q0P651 414 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 PRPSAP1Q14558 356 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 ANKRD20A2Q5SQ80 823 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 ANKRD20A1Q5TYW2 823 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 ANKRD20A3Q5VUR7 823 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 KDELC1Q6UW63 502 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 ABRAXAS1Q6UWZ7 409 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 NLGN4XQ8N0W4 816 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 TRAM1L1Q8N609 369 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 NLGN4YQ8NFZ3 816 aaPredicted RBP12.76□□□□□ -0.37
VRK3-203ENST00000424804 BLOC1S5Q8TDH9 187 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 GLYATL1Q969I3 302 aa12.76□□□□□ -0.37
VRK3-203ENST00000424804 SH3KBP1Q96B97 665 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms