RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 RBM20Q5T481 1227 aaKnown RBP15.49■□□□□ 0.07
DDX55-203ENST00000421670 TCEAL6Q6IPX3 200 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 ZNF549Q6P9A3 640 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 RABEPKQ7Z6M1 372 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 GALNT7Q86SF2 657 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 ZNF547Q8IVP9 402 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 OR2W6PQ8NHA6 318 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 CEP76Q8TAP6 659 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 HEXDCQ8WVB3 486 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 HNRNPLLQ8WVV9 542 aaKnown RBP15.49■□□□□ 0.07
DDX55-203ENST00000421670 SCG3Q8WXD2 468 aaKnown RBP15.49■□□□□ 0.07
DDX55-203ENST00000421670 TCEAL3Q969E4 200 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 SKA1Q96BD8 255 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 BIRC8Q96P09 236 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 NDNQ99608 321 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 CPNE1Q99829 537 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 TCEAL2Q9H3H9 227 aaPredicted RBP15.49■□□□□ 0.07
DDX55-203ENST00000421670 CAPN10Q9HC96 672 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 TM7SF3Q9NS93 570 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 DNAJC28Q9NX36 388 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 ZNHIT2Q9UHR6 403 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 VPS9D1Q9Y2B5 631 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 PCDHGA5Q9Y5G8 931 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 ZFHX2Q9C0A1 2572 aaPredicted RBP15.49■□□□□ 0.07
DDX55-203ENST00000421670 IQCF5A8MTL0 148 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 TNFRSF10CO14798 259 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 CHUKO15111 745 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 PBLDP30039 288 aaPredicted RBP15.49■□□□□ 0.07
DDX55-203ENST00000421670 GP5P40197 560 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 CTSKP43235 329 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 TMEM220Q6QAJ8 160 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 ZC3HC1Q86WB0 502 aaKnown RBP15.49■□□□□ 0.07
DDX55-203ENST00000421670 GALNT13Q8IUC8 556 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 LKAAEAR1Q8TD35 194 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 SLC44A1Q8WWI5 657 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 FAM136AQ96C01 138 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 SCARF2Q96GP6 870 aaPredicted RBP15.49■□□□□ 0.07
DDX55-203ENST00000421670 RBBP8Q99708 897 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 MCMBPQ9BTE3 642 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 ARGLU1Q9NWB6 273 aaPredicted RBP15.49■□□□□ 0.07
DDX55-203ENST00000421670 FAM8A1Q9UBU6 413 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 GNPTGQ9UJJ9 305 aa15.49■□□□□ 0.07
DDX55-203ENST00000421670 ARHGEF17Q96PE2 2063 aaPredicted RBP15.48■□□□□ 0.07
DDX55-203ENST00000421670 GRID2O43424 1007 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 NIPSNAP2O75323 286 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 RASGRP1O95267 797 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 IVLP07476 585 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 RETP07949 1114 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 NUDT17P0C025 328 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 ITGB6P18564 788 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 RPS3P23396 243 aaKnown RBP eCLIP15.48■□□□□ 0.07
DDX55-203ENST00000421670 GCAP28676 217 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 PRLHRP49683 370 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 HK3P52790 923 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 ADARP55265 1226 aaKnown RBP15.48■□□□□ 0.07
DDX55-203ENST00000421670 PPARDQ03181 441 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 PYCR3Q53H96 274 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 PLA2G2CQ5R387 149 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 PTRHD1Q6GMV3 140 aaKnown RBP15.48■□□□□ 0.07
DDX55-203ENST00000421670 SLC23A3Q6PIS1 610 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 CHST15Q7LFX5 561 aaPredicted RBP15.48■□□□□ 0.07
DDX55-203ENST00000421670 LRRTM4Q86VH4 590 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 SPNS2Q8IVW8 549 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 PHACTR4Q8IZ21 702 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 KRT222Q8N1A0 295 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 GPATCH11Q8N954 259 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 ACVR1CQ8NER5 493 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 VPS39Q96JC1 886 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 RHOJQ9H4E5 214 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 RAPGEFL1Q9UHV5 662 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 GMEB2Q9UKD1 530 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 PLAAQ9Y263 795 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 PLEKHM1Q9Y4G2 1056 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 GPSM3Q9Y4H4 160 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 PCDHB1Q9Y5F3 818 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 CABIN1Q9Y6J0 2220 aa15.48■□□□□ 0.07
DDX55-203ENST00000421670 SMIM23A6NLE4 172 aa15.47■□□□□ 0.07
DDX55-203ENST00000421670 GPR89AB7ZAQ6 455 aa15.47■□□□□ 0.07
DDX55-203ENST00000421670 AP2A2O94973 939 aa15.47■□□□□ 0.07
DDX55-203ENST00000421670 LMNAP02545 664 aaKnown RBP15.47■□□□□ 0.07
DDX55-203ENST00000421670 ESR1P03372 595 aa15.47■□□□□ 0.07
DDX55-203ENST00000421670 INHBAP08476 426 aa15.47■□□□□ 0.07
DDX55-203ENST00000421670 OR56A5P0C7T3 313 aa15.47■□□□□ 0.07
DDX55-203ENST00000421670 GPR89BP0CG08 455 aa15.47■□□□□ 0.07
DDX55-203ENST00000421670 ACP5P13686 325 aa15.47■□□□□ 0.07
DDX55-203ENST00000421670 PKMP14618 531 aaKnown RBP15.47■□□□□ 0.07
DDX55-203ENST00000421670 NME1P15531 152 aaKnown RBP15.47■□□□□ 0.07
DDX55-203ENST00000421670 JUNDP17535 347 aa15.47■□□□□ 0.07
DDX55-203ENST00000421670 CSE1LP55060 971 aaKnown RBP15.47■□□□□ 0.07
DDX55-203ENST00000421670 BMPR2Q13873 1038 aa15.47■□□□□ 0.07
DDX55-203ENST00000421670 BCL7AQ4VC05 210 aa15.47■□□□□ 0.07
DDX55-203ENST00000421670 C11orf96Q7Z7L8 435 aa15.47■□□□□ 0.07
DDX55-203ENST00000421670 EPS8L3Q8TE67 593 aaKnown RBP15.47■□□□□ 0.07
DDX55-203ENST00000421670 ZBTB9Q96C00 473 aa15.47■□□□□ 0.07
DDX55-203ENST00000421670 ZNF514Q96K75 400 aaPredicted RBP15.47■□□□□ 0.07
DDX55-203ENST00000421670 OR2M4Q96R27 311 aa15.47■□□□□ 0.07
DDX55-203ENST00000421670 AARSD1Q9BTE6 412 aaKnown RBP15.47■□□□□ 0.07
DDX55-203ENST00000421670 TMEM168Q9H0V1 697 aa15.47■□□□□ 0.07
DDX55-203ENST00000421670 CCDC68Q9H2F9 335 aa15.47■□□□□ 0.07
DDX55-203ENST00000421670 RMI1Q9H9A7 625 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms