RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 DUSP15Q9H1R2 295 aaPredicted RBP21.25■□□□□ 0.99
ABCF3-202ENST00000421340 SPATS2LQ9NUQ6 558 aaKnown RBP21.25■□□□□ 0.99
ABCF3-202ENST00000421340 ATXN10Q9UBB4 475 aa21.25■□□□□ 0.99
ABCF3-202ENST00000421340 LRRK1Q38SD2 2015 aa21.24■□□□□ 0.99
ABCF3-202ENST00000421340 KLHL33A6NCF5 533 aa21.24■□□□□ 0.99
ABCF3-202ENST00000421340 TYROBPO43914 113 aa21.24■□□□□ 0.99
ABCF3-202ENST00000421340 NIPSNAP2O75323 286 aa21.24■□□□□ 0.99
ABCF3-202ENST00000421340 MTX2O75431 263 aa21.24■□□□□ 0.99
ABCF3-202ENST00000421340 KELP23276 732 aa21.24■□□□□ 0.99
ABCF3-202ENST00000421340 FNTBP49356 437 aa21.24■□□□□ 0.99
ABCF3-202ENST00000421340 PRLHRP49683 370 aa21.24■□□□□ 0.99
ABCF3-202ENST00000421340 RPL6Q02878 288 aaKnown RBP21.24■□□□□ 0.99
ABCF3-202ENST00000421340 CSTF1Q05048 431 aaKnown RBP21.24■□□□□ 0.99
ABCF3-202ENST00000421340 PDAP1Q13442 181 aaKnown RBP21.24■□□□□ 0.99
ABCF3-202ENST00000421340 ZNF528Q3MIS6 628 aa21.24■□□□□ 0.99
ABCF3-202ENST00000421340 KYAT3Q6YP21 454 aaKnown RBP21.24■□□□□ 0.99
ABCF3-202ENST00000421340 CLEC14AQ86T13 490 aa21.24■□□□□ 0.99
ABCF3-202ENST00000421340 C4orf33Q8N1A6 199 aa21.24■□□□□ 0.99
ABCF3-202ENST00000421340 NELL1Q92832 810 aa21.24■□□□□ 0.99
ABCF3-202ENST00000421340 APOPT1Q96IL0 206 aa21.24■□□□□ 0.99
ABCF3-202ENST00000421340 UBXN10Q96LJ8 280 aa21.24■□□□□ 0.99
ABCF3-202ENST00000421340 OR2AG1Q9H205 316 aa21.24■□□□□ 0.99
ABCF3-202ENST00000421340 GPAMQ9HCL2 828 aa21.24■□□□□ 0.99
ABCF3-202ENST00000421340 FZD3Q9NPG1 666 aa21.24■□□□□ 0.99
ABCF3-202ENST00000421340 TRMT6Q9UJA5 497 aaKnown RBP21.24■□□□□ 0.99
ABCF3-202ENST00000421340 SLC17A4Q9Y2C5 497 aa21.24■□□□□ 0.99
ABCF3-202ENST00000421340 OR1A2Q9Y585 309 aa21.24■□□□□ 0.99
ABCF3-202ENST00000421340 TRPM6Q9BX84 2022 aa21.23■□□□□ 0.99
ABCF3-202ENST00000421340 C17orf113A0A1B0GUU1 675 aa21.23■□□□□ 0.99
ABCF3-202ENST00000421340 POM121BA6NF01 834 aa21.23■□□□□ 0.99
ABCF3-202ENST00000421340 GOLGA8RI6L899 631 aa21.23■□□□□ 0.99
ABCF3-202ENST00000421340 COPEO14579 308 aa21.23■□□□□ 0.99
ABCF3-202ENST00000421340 PHGDHO43175 533 aaKnown RBP21.23■□□□□ 0.99
ABCF3-202ENST00000421340 NUAK1O60285 661 aa21.23■□□□□ 0.99
ABCF3-202ENST00000421340 AVPR2P30518 371 aa21.23■□□□□ 0.99
ABCF3-202ENST00000421340 RABIFP47224 123 aa21.23■□□□□ 0.99
ABCF3-202ENST00000421340 PPM1JQ5JR12 505 aa21.23■□□□□ 0.99
ABCF3-202ENST00000421340 ZNF648Q5T619 568 aaPredicted RBP21.23■□□□□ 0.99
ABCF3-202ENST00000421340 TMEM220Q6QAJ8 160 aa21.23■□□□□ 0.99
ABCF3-202ENST00000421340 TSSK4Q6SA08 328 aa21.23■□□□□ 0.99
ABCF3-202ENST00000421340 GCNT7Q6ZNI0 430 aa21.23■□□□□ 0.99
ABCF3-202ENST00000421340 NKAPQ8N5F7 415 aaKnown RBP21.23■□□□□ 0.99
ABCF3-202ENST00000421340 ARFGAP2Q8N6H7 521 aa21.23■□□□□ 0.99
ABCF3-202ENST00000421340 SCARF2Q96GP6 870 aaPredicted RBP21.23■□□□□ 0.99
ABCF3-202ENST00000421340 PDLIM5Q96HC4 596 aaKnown RBP21.23■□□□□ 0.99
ABCF3-202ENST00000421340 GPR21Q99679 349 aa21.23■□□□□ 0.99
ABCF3-202ENST00000421340 VPS11Q9H270 941 aa21.23■□□□□ 0.99
ABCF3-202ENST00000421340 GRID1Q9ULK0 1009 aa21.23■□□□□ 0.99
ABCF3-202ENST00000421340 INVSQ9Y283 1065 aa21.23■□□□□ 0.99
ABCF3-202ENST00000421340 CCDC189A1A4V9 331 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 A6NNZ2 444 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 IQCF5A8MTL0 148 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 EIF3FO00303 357 aaPredicted RBP21.22■□□□□ 0.99
ABCF3-202ENST00000421340 TNFRSF10CO14798 259 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 LILRB5O75023 590 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 GLRA3O75311 464 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 TRIM16O95361 564 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 ASMTLO95671 621 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 CBSLP0DN79 551 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 CREB1P16220 341 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 ZNF8P17098 575 aaPredicted RBP21.22■□□□□ 0.99
ABCF3-202ENST00000421340 AOAHP28039 575 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 HTR1BP28222 390 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 CBSP35520 551 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 CTSCP53634 463 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 CLDN2P57739 230 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 PPP2R2AP63151 447 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 DET1Q7L5Y6 550 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 TBC1D1Q86TI0 1168 aaPredicted RBP21.22■□□□□ 0.99
ABCF3-202ENST00000421340 TRIM74Q86UV6 250 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 DCP2Q8IU60 420 aaKnown RBP21.22■□□□□ 0.99
ABCF3-202ENST00000421340 CD200R1Q8TD46 325 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 DNASE2BQ8WZ79 361 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 CCM2Q9BSQ5 444 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 C1QTNF1Q9BXJ1 281 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 PCMTD2Q9NV79 361 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 TMEM98Q9Y2Y6 226 aa21.22■□□□□ 0.99
ABCF3-202ENST00000421340 TM9SF1O15321 606 aa21.21■□□□□ 0.99
ABCF3-202ENST00000421340 KCNJ13O60928 360 aa21.21■□□□□ 0.99
ABCF3-202ENST00000421340 DNAJC6O75061 913 aa21.21■□□□□ 0.99
ABCF3-202ENST00000421340 KLHL2O95198 593 aa21.21■□□□□ 0.99
ABCF3-202ENST00000421340 ZNF37AP17032 561 aaPredicted RBP21.21■□□□□ 0.99
ABCF3-202ENST00000421340 NR1D1P20393 614 aa21.21■□□□□ 0.99
ABCF3-202ENST00000421340 CNR2P34972 360 aa21.21■□□□□ 0.99
ABCF3-202ENST00000421340 NUBP1P53384 320 aa21.21■□□□□ 0.99
ABCF3-202ENST00000421340 OVGP1Q12889 678 aa21.21■□□□□ 0.99
ABCF3-202ENST00000421340 NFATC4Q14934 902 aa21.21■□□□□ 0.99
ABCF3-202ENST00000421340 FAM83EQ2M2I3 478 aa21.21■□□□□ 0.99
ABCF3-202ENST00000421340 TSNAXIP1Q2TAA8 658 aa21.21■□□□□ 0.99
ABCF3-202ENST00000421340 TTLL9Q3SXZ7 439 aa21.21■□□□□ 0.99
ABCF3-202ENST00000421340 PLEKHS1Q5SXH7 462 aa21.21■□□□□ 0.99
ABCF3-202ENST00000421340 PAQR3Q6TCH7 311 aa21.21■□□□□ 0.99
ABCF3-202ENST00000421340 TMEM207Q6UWW9 146 aa21.21■□□□□ 0.99
ABCF3-202ENST00000421340 IQCHQ86VS3 1027 aa21.21■□□□□ 0.99
ABCF3-202ENST00000421340 KRT222Q8N1A0 295 aa21.21■□□□□ 0.99
ABCF3-202ENST00000421340 ZBTB2Q8N680 514 aa21.21■□□□□ 0.99
ABCF3-202ENST00000421340 SIDT2Q8NBJ9 832 aaKnown RBP21.21■□□□□ 0.99
ABCF3-202ENST00000421340 GAB3Q8WWW8 586 aa21.21■□□□□ 0.99
ABCF3-202ENST00000421340 TSNARE1Q96NA8 513 aa21.21■□□□□ 0.99
ABCF3-202ENST00000421340 SLC13A1Q9BZW2 595 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms