RNA–Protein interactions for RNA: ENST00000419357.5

LINC00243-202, long intergenic non-protein coding RNA 243, humanhuman

TSL 3

Gene LINC00243, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-202ENST00000419357 VRK1Q99986 396 aaPredicted RBP4.39□□□□□ -1.71
LINC00243-202ENST00000419357 DDA1Q9BW61 102 aa4.39□□□□□ -1.71
LINC00243-202ENST00000419357 TEX101Q9BY14 249 aa4.39□□□□□ -1.71
LINC00243-202ENST00000419357 KRTAP9-8Q9BYQ0 159 aa4.39□□□□□ -1.71
LINC00243-202ENST00000419357 LRRC2Q9BYS8 371 aa4.39□□□□□ -1.71
LINC00243-202ENST00000419357 SPRTNQ9H040 489 aaPredicted RBP4.39□□□□□ -1.71
LINC00243-202ENST00000419357 CLPBQ9H078 707 aa4.39□□□□□ -1.71
LINC00243-202ENST00000419357 ILKAPQ9H0C8 392 aaPredicted RBP4.39□□□□□ -1.71
LINC00243-202ENST00000419357 GPRC5BQ9NZH0 403 aa4.39□□□□□ -1.71
LINC00243-202ENST00000419357 DKK2Q9UBU2 259 aa4.39□□□□□ -1.71
LINC00243-202ENST00000419357 SH3BGRL2Q9UJC5 107 aa4.39□□□□□ -1.71
LINC00243-202ENST00000419357 PLEKHA6Q9Y2H5 1048 aa4.39□□□□□ -1.71
LINC00243-202ENST00000419357 RPS6KL1Q9Y6S9 549 aa4.39□□□□□ -1.71
LINC00243-202ENST00000419357 ZGRF1Q86YA3 2104 aa4.39□□□□□ -1.71
LINC00243-202ENST00000419357 TCHHQ07283 1943 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 ANK3Q12955 4377 aaKnown RBP4.38□□□□□ -1.71
LINC00243-202ENST00000419357 SCN1AP35498 2009 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 FER1L5A0AVI2 2057 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 SPTY2D1-AS1A0A0U1RR47 76 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 POM121BA6NF01 834 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 LMO7DNF2Z398 122 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 SLC16A6O15403 523 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 PHF1O43189 567 aaPredicted RBP4.38□□□□□ -1.71
LINC00243-202ENST00000419357 HUS1O60921 280 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 SLC43A1O75387 559 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 CRLF1O75462 422 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 CREG1O75629 220 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 STK17BO94768 372 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 IFNA2P01563 188 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 ATP5BP06576 529 aaKnown RBP4.38□□□□□ -1.71
LINC00243-202ENST00000419357 HMBSP08397 361 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 CLTAP09496 248 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 MTHFD1P11586 935 aaKnown RBP4.38□□□□□ -1.71
LINC00243-202ENST00000419357 TSHRP16473 764 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 POLR2EP19388 210 aaKnown RBP4.38□□□□□ -1.71
LINC00243-202ENST00000419357 LPOP22079 712 aaPredicted RBP4.38□□□□□ -1.71
LINC00243-202ENST00000419357 HNRNPA2B1P22626 353 aaKnown RBP4.38□□□□□ -1.71
LINC00243-202ENST00000419357 GCSHP23434 173 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 SLC6A2P23975 617 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 PBX1P40424 430 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 PGFP49763 221 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 HK3P52790 923 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 PEX3P56589 373 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 ST8SIA6P61647 398 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 NOP14P78316 857 aaKnown RBP4.38□□□□□ -1.71
LINC00243-202ENST00000419357 EIF2B5Q13144 721 aaKnown RBP4.38□□□□□ -1.71
LINC00243-202ENST00000419357 GTF2H3Q13889 308 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 PDE1CQ14123 709 aaPredicted RBP4.38□□□□□ -1.71
LINC00243-202ENST00000419357 ARHGEF7Q14155 803 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 PFKFB3Q16875 520 aaPredicted RBP4.38□□□□□ -1.71
LINC00243-202ENST00000419357 PGS1Q32NB8 556 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 PDCD4Q53EL6 469 aaKnown RBP4.38□□□□□ -1.71
LINC00243-202ENST00000419357 CRB2Q5IJ48 1285 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 C9orf64Q5T6V5 341 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 PAPD7Q5XG87 772 aaKnown RBP4.38□□□□□ -1.71
LINC00243-202ENST00000419357 XKRXQ6PP77 449 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 VSTM1Q6UX27 236 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 RHOUQ7L0Q8 258 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 ADIPOR2Q86V24 386 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 PARGQ86W56 976 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 TRIM69Q86WT6 500 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 MB21D2Q8IYB1 491 aaPredicted RBP4.38□□□□□ -1.71
LINC00243-202ENST00000419357 NUP93Q8N1F7 819 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 FITM2Q8N6M3 262 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 ARL10Q8N8L6 244 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 C3orf20Q8ND61 904 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 SCAMP5Q8TAC9 235 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 BICD2Q8TD16 824 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 CCDC12Q8WUD4 166 aaPredicted RBP4.38□□□□□ -1.71
LINC00243-202ENST00000419357 SLC25A43Q8WUT9 341 aaPredicted RBP4.38□□□□□ -1.71
LINC00243-202ENST00000419357 RTP4Q96DX8 246 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 AIFM3Q96NN9 605 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 NUDT9Q9BW91 350 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 SPRY4Q9C004 299 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 ING2Q9H160 280 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 DCTPP1Q9H773 170 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 FGF21Q9NSA1 209 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 ABCB8Q9NUT2 735 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 DPP3Q9NY33 737 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 APOBEC3BQ9UH17 382 aaKnown RBP4.38□□□□□ -1.71
LINC00243-202ENST00000419357 L1RE1Q9UN81 338 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 GPR34Q9UPC5 381 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 B3GNT3Q9Y2A9 372 aa4.38□□□□□ -1.71
LINC00243-202ENST00000419357 KMT2CQ8NEZ4 4911 aaKnown RBP4.38□□□□□ -1.71
LINC00243-202ENST00000419357 IGHV5-10-1A0A0J9YXX1 117 aa4.37□□□□□ -1.71
LINC00243-202ENST00000419357 GAGE12BA1L429 117 aa4.37□□□□□ -1.71
LINC00243-202ENST00000419357 GAGE12HA6NDE8 117 aa4.37□□□□□ -1.71
LINC00243-202ENST00000419357 LRRC14BA6NHZ5 514 aa4.37□□□□□ -1.71
LINC00243-202ENST00000419357 A6NNZ2 444 aa4.37□□□□□ -1.71
LINC00243-202ENST00000419357 TTC34A8MYJ7 566 aa4.37□□□□□ -1.71
LINC00243-202ENST00000419357 NPIPB8E9PQR5 432 aa4.37□□□□□ -1.71
LINC00243-202ENST00000419357 E2F3O00716 465 aa4.37□□□□□ -1.71
LINC00243-202ENST00000419357 KIAA0391O15091 583 aaKnown RBP4.37□□□□□ -1.71
LINC00243-202ENST00000419357 CLDN3O15551 220 aa4.37□□□□□ -1.71
LINC00243-202ENST00000419357 PROM1O43490 865 aa4.37□□□□□ -1.71
LINC00243-202ENST00000419357 B4GAT1O43505 415 aa4.37□□□□□ -1.71
LINC00243-202ENST00000419357 PLRG1O43660 514 aaKnown RBP4.37□□□□□ -1.71
LINC00243-202ENST00000419357 TLR5O60602 858 aa4.37□□□□□ -1.71
LINC00243-202ENST00000419357 DTNBO60941 627 aa4.37□□□□□ -1.71
LINC00243-202ENST00000419357 LYPLA2O95372 231 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms