RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 UBA2Q9UBT2 640 aaPredicted RBP7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 DSEQ9UL01 958 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 TPRKBQ9Y3C4 175 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 DCLK1O15075 740 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 CD36P16671 472 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 NFKB1P19838 968 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 NUDT1P36639 197 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 ZFP36L2P47974 494 aaKnown RBP7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 ZNF135P52742 658 aaPredicted RBP7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 MFSD10Q14728 455 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 NXNL2Q5VZ03 156 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 ANKRD34AQ69YU3 496 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 NAPEPLDQ6IQ20 393 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 CADM2Q8N3J6 435 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 TMEM199Q8N511 208 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 RNF170Q96K19 258 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 PRMT6Q96LA8 375 aaPredicted RBP7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 COQ7Q99807 217 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 C12orf10Q9HB07 376 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 ACOT13Q9NPJ3 140 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 INTS7Q9NVH2 962 aaKnown RBP7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 SLAMF8Q9P0V8 285 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 TRHDEQ9UKU6 1024 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 RABL2BQ9UNT1 228 aa7.95□□□□□ -1.14
HMGXB4-202ENST00000418170 SSX4O60224 188 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 TPPPO94811 219 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 SEMA3DO95025 777 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 C1RP00736 705 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 SCNN1AP37088 669 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 IL5RAQ01344 420 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 TRIP4Q15650 581 aaPredicted RBP7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 UNC50Q53HI1 259 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 OTOP3Q7RTS5 596 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 B3GNT8Q7Z7M8 397 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 C2CD4AQ8NCU7 369 aaPredicted RBP7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 ZNF280CQ8ND82 737 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 TUBGCP3Q96CW5 907 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 ZFYVE19Q96K21 471 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 MKRN2Q9H000 416 aaKnown RBP7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 ZBTB20Q9HC78 741 aaPredicted RBP7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 TRIM39Q9HCM9 518 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 POLG2Q9UHN1 485 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 LEF1Q9UJU2 399 aaPredicted RBP7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 NUDT5Q9UKK9 219 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 GRIP1Q9Y3R0 1128 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 PCDHGB6Q9Y5F9 930 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 BCKDKO14874 412 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 RAD17O75943 681 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 MT-ND2P03891 347 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 CYP11A1P05108 521 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 ANXA6P08133 673 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 MRPL19P49406 292 aaKnown RBP7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 CLK1P49759 484 aaKnown RBP7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 BCAT1P54687 386 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 DIO3P55073 304 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 HERVK_113P63132 956 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 GRIK2Q13002 908 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 RAPSNQ13702 412 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 ZC3H12BQ5HYM0 836 aaKnown RBP7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 PCID2Q5JVF3 399 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 RBM20Q5T481 1227 aaKnown RBP7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 JADE1Q6IE81 842 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 ZNF438Q7Z4V0 828 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 ADAMTSL2Q86TH1 951 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 ZBTB8OSQ8IWT0 167 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 TEX37Q96LM6 180 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 DMRTB1Q96MA1 342 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 TTYH2Q9BSA4 534 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 ERVK-6Q9BXR3 956 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 REXO4Q9GZR2 422 aaKnown RBP7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 TUBB1Q9H4B7 451 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 RPRD1BQ9NQG5 326 aaKnown RBP7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 COMMD8Q9NX08 183 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 SPEF1Q9Y4P9 236 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 DOCK1Q14185 1865 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 LACTBL1A8MY62 500 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 POLR1CO15160 346 aaPredicted RBP7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 CAPN5O15484 640 aaPredicted RBP7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 HS6ST1O60243 411 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 CDK14O94921 469 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 MED26O95402 600 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 FADS2O95864 444 aaKnown RBP7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 CST1P01037 141 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 NPPAP01160 153 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 CYP2C8P10632 490 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 CES1P23141 567 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 S100A5P33763 92 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 OR3A3P47888 321 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 CXCR4P61073 352 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 GPR50Q13585 617 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 Q5BKY6 102 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 ATF7IP2Q5U623 682 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 EEF1DP3Q658K8 133 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 SPESP1Q6UW49 350 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 IDO2Q6ZQW0 420 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 SLC51BQ86UW2 128 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 SPNS2Q8IVW8 549 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 FAM109AQ8N4B1 249 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 AMER2Q8N7J2 671 aa7.94□□□□□ -1.14
HMGXB4-202ENST00000418170 MAP6Q96JE9 813 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 419.3 ms