RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 SEPT6Q14141 434 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 SPARCL1Q14515 664 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 C16orf46Q6P387 395 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 PELI3Q8N2H9 469 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 GLIS1Q8NBF1 620 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 IPMKQ8NFU5 416 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 ZDHHC1Q8WTX9 485 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 KIAA1143Q96AT1 154 aaPredicted RBP17.77■□□□□ 0.44
VCP-202ENST00000417448 SCRN2Q96FV2 425 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 FCRL5Q96RD9 977 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 TRIB3Q96RU7 358 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 OSBPL9Q96SU4 736 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 CTRCQ99895 268 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 APOL2Q9BQE5 337 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 MLPHQ9BV36 600 aaPredicted RBP17.77■□□□□ 0.44
VCP-202ENST00000417448 AP1M1Q9BXS5 423 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 CD84Q9UIB8 345 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 TRHDEQ9UKU6 1024 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 VPS4AQ9UN37 437 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 ZNF148Q9UQR1 794 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 ST14Q9Y5Y6 855 aa17.77■□□□□ 0.44
VCP-202ENST00000417448 CACNB4O00305 520 aaPredicted RBP17.76■□□□□ 0.43
VCP-202ENST00000417448 TNFRSF10CO14798 259 aa17.76■□□□□ 0.43
VCP-202ENST00000417448 FANCGO15287 622 aa17.76■□□□□ 0.43
VCP-202ENST00000417448 PPM1DO15297 605 aa17.76■□□□□ 0.43
VCP-202ENST00000417448 RECQL5O94762 991 aaPredicted RBP17.76■□□□□ 0.43
VCP-202ENST00000417448 HEXIM1O94992 359 aaKnown RBP17.76■□□□□ 0.43
VCP-202ENST00000417448 CLDN7O95471 211 aa17.76■□□□□ 0.43
VCP-202ENST00000417448 METTL18O95568 372 aa17.76■□□□□ 0.43
VCP-202ENST00000417448 AGTP01019 485 aa17.76■□□□□ 0.43
VCP-202ENST00000417448 MAP4P27816 1152 aaKnown RBP17.76■□□□□ 0.43
VCP-202ENST00000417448 SUOXP51687 545 aa17.76■□□□□ 0.43
VCP-202ENST00000417448 CDK18Q07002 472 aa17.76■□□□□ 0.43
VCP-202ENST00000417448 OASLQ15646 514 aaKnown RBP17.76■□□□□ 0.43
VCP-202ENST00000417448 TCTN3Q6NUS6 607 aa17.76■□□□□ 0.43
VCP-202ENST00000417448 NRSN1Q8IZ57 195 aa17.76■□□□□ 0.43
VCP-202ENST00000417448 GALNT11Q8NCW6 608 aa17.76■□□□□ 0.43
VCP-202ENST00000417448 MRGPRX2Q96LB1 330 aa17.76■□□□□ 0.43
VCP-202ENST00000417448 SPATA13Q96N96 652 aa17.76■□□□□ 0.43
VCP-202ENST00000417448 VAT1Q99536 393 aa17.76■□□□□ 0.43
VCP-202ENST00000417448 GBA3Q9H227 469 aa17.76■□□□□ 0.43
VCP-202ENST00000417448 PRDM8Q9NQV8 689 aa17.76■□□□□ 0.43
VCP-202ENST00000417448 FAM153AQ9UHL3 310 aa17.76■□□□□ 0.43
VCP-202ENST00000417448 PPIL1Q9Y3C6 166 aa17.76■□□□□ 0.43
VCP-202ENST00000417448 IGHV1OR21-1A0A087WYE8 117 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 PRSS38A1L453 326 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 ANKRD66B4E2M5 251 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 STK10O94804 968 aaKnown RBP17.75■□□□□ 0.43
VCP-202ENST00000417448 IFNB1P01574 187 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 SLC4A1P02730 911 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 FUCA1P04066 466 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 PDGFAP04085 211 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 ZSCAN5DPP0CG00 497 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 CYP2A6P11509 494 aaPredicted RBP17.75■□□□□ 0.43
VCP-202ENST00000417448 TCN2P20062 427 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 F8A1P23610 371 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 AK4P27144 223 aaPredicted RBP17.75■□□□□ 0.43
VCP-202ENST00000417448 DCTP40126 519 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 ETV3P41162 512 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 GPR3P46089 330 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 RAB15P59190 212 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 CRTC2Q53ET0 693 aaPredicted RBP17.75■□□□□ 0.43
VCP-202ENST00000417448 LRRC66Q68CR7 880 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 Q6ZVL8 140 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 ASB18Q6ZVZ8 466 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 USP45Q70EL2 814 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 PRELID2Q8N945 189 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 UBE2Q2Q8WVN8 375 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 PBKQ96KB5 322 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 MCCC1Q96RQ3 725 aaPredicted RBP17.75■□□□□ 0.43
VCP-202ENST00000417448 FICDQ9BVA6 458 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 TAAR2Q9P1P5 351 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 MOSPD1Q9UJG1 213 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 SNX12Q9UMY4 172 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 SHOC2Q9UQ13 582 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 SPO11Q9Y5K1 396 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 POLQO75417 2590 aa17.75■□□□□ 0.43
VCP-202ENST00000417448 A0A1W2PQ67 120 aa17.74■□□□□ 0.43
VCP-202ENST00000417448 C5orf60A6NFR6 353 aa17.74■□□□□ 0.43
VCP-202ENST00000417448 FURINP09958 794 aa17.74■□□□□ 0.43
VCP-202ENST00000417448 CA4P22748 312 aa17.74■□□□□ 0.43
VCP-202ENST00000417448 TRIM23P36406 574 aa17.74■□□□□ 0.43
VCP-202ENST00000417448 PTSQ03393 145 aa17.74■□□□□ 0.43
VCP-202ENST00000417448 ABHD18Q0P651 414 aa17.74■□□□□ 0.43
VCP-202ENST00000417448 SQSTM1Q13501 440 aa17.74■□□□□ 0.43
VCP-202ENST00000417448 SIRPB2Q5JXA9 342 aa17.74■□□□□ 0.43
VCP-202ENST00000417448 ARHGEF18Q6ZSZ5 1173 aa17.74■□□□□ 0.43
VCP-202ENST00000417448 HEATR4Q86WZ0 1026 aa17.74■□□□□ 0.43
VCP-202ENST00000417448 TICAM1Q8IUC6 712 aa17.74■□□□□ 0.43
VCP-202ENST00000417448 NAGSQ8N159 534 aa17.74■□□□□ 0.43
VCP-202ENST00000417448 RASGEF1CQ8N431 466 aa17.74■□□□□ 0.43
VCP-202ENST00000417448 PTCD2Q8WV60 388 aaKnown RBP17.74■□□□□ 0.43
VCP-202ENST00000417448 SPOCK2Q92563 424 aa17.74■□□□□ 0.43
VCP-202ENST00000417448 COQ10AQ96MF6 247 aa17.74■□□□□ 0.43
VCP-202ENST00000417448 TEFMQ96QE5 360 aaKnown RBP17.74■□□□□ 0.43
VCP-202ENST00000417448 EFHD1Q9BUP0 239 aa17.74■□□□□ 0.43
VCP-202ENST00000417448 SUDS3Q9H7L9 328 aaPredicted RBP17.74■□□□□ 0.43
VCP-202ENST00000417448 APMAPQ9HDC9 416 aa17.74■□□□□ 0.43
VCP-202ENST00000417448 KCTD3Q9Y597 815 aa17.74■□□□□ 0.43
VCP-202ENST00000417448 AURKAO14965 403 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms