RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 HSF2Q03933 536 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 CSTF1Q05048 431 aaKnown RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 CXCL9Q07325 125 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 ACSM1Q08AH1 577 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 BNIP3Q12983 259 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 RESTQ13127 1097 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 PDE7AQ13946 482 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 UBAP2LQ14157 1087 aaKnown RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 BTG3Q14201 252 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 HNRNPA1L2Q32P51 320 aaKnown RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 IQCCQ4KMZ1 466 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 ZNF311Q5JNZ3 666 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 WLSQ5T9L3 541 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 NDUFAF5Q5TEU4 345 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 LRRC38Q5VT99 294 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 CDKAL1Q5VV42 579 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 C18orf63Q68DL7 685 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 CEP85Q6P2H3 762 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 TRIM65Q6PJ69 517 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 ABHD15Q6UXT9 468 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 NHLRC1Q6VVB1 395 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 RNF111Q6ZNA4 994 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 HTR3DQ70Z44 454 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 ANO5Q75V66 913 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC51AQ86UW1 340 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 SERINC5Q86VE9 423 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 FJX1Q86VR8 437 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 PAQR7Q86WK9 346 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 WFDC8Q8IUA0 241 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 GRAMD2AQ8IUY3 354 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 MISPQ8IVT2 679 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 CDKL3Q8IVW4 592 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 KATNAL2Q8IYT4 538 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 RNF148Q8N7C7 305 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 AMER2Q8N7J2 671 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 PLD5Q8N7P1 536 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC17A8Q8NDX2 589 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 STKLD1Q8NE28 680 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 MCPH1Q8NEM0 835 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 SPATA4Q8NEY3 305 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 DNERQ8NFT8 737 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 OR52B4Q8NGK2 314 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 CDC26Q8NHZ8 85 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 ANGPTL6Q8NI99 470 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 OCC1Q8TAD7 63 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 LKAAEAR1Q8TD35 194 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 PLEKHO2Q8TD55 490 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 HEXDCQ8WVB3 486 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 SEPT8Q92599 483 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 PIGKQ92643 395 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 SCAMP4Q969E2 229 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 CAVIN3Q969G5 261 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 SPSB1Q96BD6 273 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC7A6OSQ96CW6 309 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 LINGO1Q96FE5 620 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC47A1Q96FL8 570 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 SLC41A3Q96GZ6 507 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 OXNAD1Q96HP4 312 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 DYDC2Q96IM9 177 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 PHACTR3Q96KR7 559 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 LURAP1Q96LR2 239 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 TMEM68Q96MH6 324 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 TBC1D32Q96NH3 1257 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 LRRC3BQ96PB8 259 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 HIST1H2AAQ96QV6 131 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 SPAG8Q99932 426 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 FAM83CQ9BQN1 747 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 MESP1Q9BRJ9 268 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 KATNB1Q9BVA0 655 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 NUP58Q9BVL2 599 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 SF3B5Q9BWJ5 86 aaKnown RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 BTBD2Q9BX70 525 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 SHCBP1LQ9BZQ2 653 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 NAPBQ9H115 298 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 DNTTIP1Q9H147 329 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 BLZF1Q9H2G9 400 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 GOLPH3LQ9H4A5 285 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 GSX1Q9H4S2 264 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 RGCCQ9H4X1 137 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 PDZD7Q9H5P4 517 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 RIOX1Q9H6W3 641 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 MVB12BQ9H7P6 319 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 EVA1AQ9H8M9 152 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 USP29Q9HBJ7 922 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 EPB41L5Q9HCM4 733 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 PNPLA3Q9NST1 481 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 MAN2C1Q9NTJ4 1040 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 C20orf141Q9NUB4 165 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 SETD4Q9NVD3 440 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 SPATA6Q9NWH7 488 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 PAG1Q9NWQ8 432 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 SLCO1C1Q9NYB5 712 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 KCNK4Q9NYG8 393 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 JKAMPQ9P055 326 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 DNMT3BQ9UBC3 853 aaKnown RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 UXTQ9UBK9 157 aaPredicted RBP3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 CROTQ9UKG9 612 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 DDX19BQ9UMR2 479 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 A4GNTQ9UNA3 340 aa3.1□□□□□ -1.91
CTDSPL-203ENST00000416688 RCE1Q9Y256 329 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms