RNA–Protein interactions for RNA: ENST00000415585.6

CSTF2-203, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 1 (best) BASIC

Gene CSTF2, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-203ENST00000415585 MARCH5Q9NX47 278 aa13.17□□□□□ -0.3
CSTF2-203ENST00000415585 SUN2Q9UH99 717 aa13.17□□□□□ -0.3
CSTF2-203ENST00000415585 DNMT3LQ9UJW3 386 aa13.17□□□□□ -0.3
CSTF2-203ENST00000415585 ANAPC2Q9UJX6 822 aa13.17□□□□□ -0.3
CSTF2-203ENST00000415585 USP22Q9UPT9 525 aa13.17□□□□□ -0.3
CSTF2-203ENST00000415585 FNDC3AQ9Y2H6 1198 aaKnown RBP13.17□□□□□ -0.3
CSTF2-203ENST00000415585 RAI2Q9Y5P3 530 aa13.17□□□□□ -0.3
CSTF2-203ENST00000415585 TRIM64A6NGJ6 449 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 SYNCRIPO60506 623 aaKnown RBP13.16□□□□□ -0.3
CSTF2-203ENST00000415585 F11P03951 625 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 UMPSP11172 480 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 ATF6P18850 670 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 ATP5C1P36542 298 aaKnown RBP13.16□□□□□ -0.3
CSTF2-203ENST00000415585 SLC11A2P49281 568 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 VEGFBP49765 207 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 SGSHP51688 502 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 EMX2Q04743 252 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 PTPRRQ15256 657 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 ZRANB3Q5FWF4 1079 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 DENND1CQ8IV53 801 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 TBC1D21Q8IYX1 336 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 EFHBQ8N7U6 833 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 FNDC5Q8NAU1 212 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 OR52B6Q8NGF0 335 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 PROKR1Q8TCW9 393 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 ADAMTS16Q8TE57 1224 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 FBXL20Q96IG2 436 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 CDK15Q96Q40 435 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 ZNF382Q96SR6 550 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 RETREG1Q9H6L5 497 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 RPF2Q9H7B2 306 aaKnown RBP13.16□□□□□ -0.3
CSTF2-203ENST00000415585 KANSL1LA0AUZ9 987 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 ANKRD66B4E2M5 251 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 CBX4O00257 560 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 PFDN6O15212 129 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 TBC1D4O60343 1298 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 CLDN11O75508 207 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 SEC24DO94855 1032 aaPredicted RBP13.16□□□□□ -0.3
CSTF2-203ENST00000415585 GJB5O95377 273 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 CLIC3O95833 236 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 RHOCP08134 193 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 HRH2P25021 359 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 CLCN4P51793 760 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 ERVPABLB-1P60509 514 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 TGFBIQ15582 683 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 FXNQ16595 210 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 AASDHQ4L235 1098 aaPredicted RBP13.16□□□□□ -0.3
CSTF2-203ENST00000415585 ATP6AP1LQ52LC2 224 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 RTP2Q5QGT7 225 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 Q6ZSR9 355 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 GPR141Q7Z602 305 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 ZFAND4Q86XD8 727 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 GAB3Q8WWW8 586 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 KCNJ9Q92806 393 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 CD320Q9NPF0 282 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 TMEM161AQ9NX61 479 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 SRRDQ9UH36 339 aa13.16□□□□□ -0.3
CSTF2-203ENST00000415585 THSD7BQ9C0I4 1608 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 A0A0U1RQS6 177 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 ILVBLA1L0T0 632 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 E5RI56 91 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 STX7O15400 261 aaKnown RBP13.15□□□□□ -0.3
CSTF2-203ENST00000415585 CLOCKO15516 846 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 NPPAP01160 153 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 ENO2P09104 434 aaPredicted RBP13.15□□□□□ -0.3
CSTF2-203ENST00000415585 HTR1EP28566 365 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 GATMP50440 423 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 ESRRGP62508 458 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 PRKG2Q13237 762 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 LETMD1Q6P1Q0 360 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 FUT10Q6P4F1 479 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 SLC2A7Q6PXP3 512 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 SFRP1Q8N474 314 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 TTC30BQ8N4P2 665 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 ZNF784Q8NCA9 323 aaPredicted RBP13.15□□□□□ -0.3
CSTF2-203ENST00000415585 ISG20Q96AZ6 181 aaKnown RBP13.15□□□□□ -0.3
CSTF2-203ENST00000415585 BIRC7Q96CA5 298 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 CDK5RAP1Q96SZ6 601 aaKnown RBP13.15□□□□□ -0.3
CSTF2-203ENST00000415585 TTLL2Q9BWV7 592 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 ADGRE3Q9BY15 652 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 NACA2Q9H009 215 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 PIF1Q9H611 641 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 SARS2Q9NP81 518 aaKnown RBP13.15□□□□□ -0.3
CSTF2-203ENST00000415585 TMEM45AQ9NWC5 275 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 SMPD3Q9NY59 655 aaPredicted RBP13.15□□□□□ -0.3
CSTF2-203ENST00000415585 HCSTQ9UBK5 93 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 FADS3Q9Y5Q0 445 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 PLXNA4Q9HCM2 1894 aa13.15□□□□□ -0.3
CSTF2-203ENST00000415585 IQCF5A8MTL0 148 aa13.14□□□□□ -0.31
CSTF2-203ENST00000415585 LDLRP01130 860 aa13.14□□□□□ -0.31
CSTF2-203ENST00000415585 MT-ND1P03886 318 aa13.14□□□□□ -0.31
CSTF2-203ENST00000415585 CAPGP40121 348 aa13.14□□□□□ -0.31
CSTF2-203ENST00000415585 RPS9P46781 194 aaKnown RBP13.14□□□□□ -0.31
CSTF2-203ENST00000415585 SLC11A1P49279 550 aa13.14□□□□□ -0.31
CSTF2-203ENST00000415585 HTR6P50406 440 aa13.14□□□□□ -0.31
CSTF2-203ENST00000415585 ACLYP53396 1101 aa13.14□□□□□ -0.31
CSTF2-203ENST00000415585 OR4D2P58180 307 aa13.14□□□□□ -0.31
CSTF2-203ENST00000415585 SMARCB1Q12824 385 aa13.14□□□□□ -0.31
CSTF2-203ENST00000415585 TRAF2Q12933 501 aa13.14□□□□□ -0.31
CSTF2-203ENST00000415585 ZBED5Q49AG3 693 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms