RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 ZNF423Q2M1K9 1284 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 UGT3A2Q3SY77 523 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 PIGGQ5H8A4 983 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 CDKL4Q5MAI5 379 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 CTSL3PQ5NE16 218 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 IER5LQ5T953 404 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 TRIM68Q6AZZ1 485 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 OGFOD2Q6N063 350 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 TPGS1Q6ZTW0 290 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 SPATA31D4Q6ZUB0 917 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 TPRG1Q6ZUI0 275 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 KBTBD6Q86V97 674 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 SERPINA9Q86WD7 417 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 PIANPQ8IYJ0 282 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 KLHL23Q8NBE8 558 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 SIDT2Q8NBJ9 832 aaKnown RBP13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 PIP4K2CQ8TBX8 421 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 PHOSPHO2Q8TCD6 241 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 EEF1AKMT1Q8WVE0 214 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 CLP1Q92989 425 aaKnown RBP13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 CCDC124Q96CT7 223 aaKnown RBP13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 TUBGCP3Q96CW5 907 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 NSMCE3Q96MG7 304 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 NR1H4Q96RI1 486 aaPredicted RBP13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 EFHD1Q9BUP0 239 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 SLC2A11Q9BYW1 496 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 TM6SF2Q9BZW4 377 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 TRIM15Q9C019 465 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 KLHL4Q9C0H6 718 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 Q9H521 79 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 YY1AP1Q9H869 796 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 AKTIPQ9H8T0 292 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 SPATS2LQ9NUQ6 558 aaKnown RBP13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 FAM86C1Q9NVL1 165 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 ADA2Q9NZK5 511 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 SUCOQ9UBS9 1254 aaKnown RBP13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 PSMD13Q9UNM6 376 aa13.34□□□□□ -0.27
SSR4P1-201ENST00000415143 ANKRD36A6QL64 1941 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 TRBV5-4A0A0C4DH59 114 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 A0A1W2PRU2 124 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 CDC7O00311 574 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 UBFD1O14562 309 aaKnown RBP13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 ZNF197O14709 1029 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 ANGPT2O15123 496 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 NIPSNAP2O75323 286 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 BCAS2O75934 225 aaPredicted RBP13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 MATN4O95460 622 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 JUNP05412 331 aaKnown RBP13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 HNRNPA1P09651 372 aaKnown RBP eCLIP13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 CYP2A6P11509 494 aaPredicted RBP13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 ACRV1P26436 265 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 HOXA9P31269 272 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 PIK3CGP48736 1102 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 CLCN7P51798 805 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 FOXM1Q08050 763 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 NFATC2Q13469 925 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 PCBP2Q15366 365 aaKnown RBP eCLIP13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 CARD16Q5EG05 197 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 TCHHL1Q5QJ38 904 aaPredicted RBP13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 REP15Q6BDI9 236 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 CLEC6AQ6EIG7 209 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 MACC1Q6ZN28 852 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 GPRIN3Q6ZVF9 776 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 HS6ST3Q8IZP7 471 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 KIAA1958Q8N8K9 716 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 TTC16Q8NEE8 873 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 SH3RF2Q8TEC5 729 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 PPP2R3CQ969Q6 453 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 LRGUKQ96M69 825 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 ZNF382Q96SR6 550 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 SUV39H2Q9H5I1 410 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 SARS2Q9NP81 518 aaKnown RBP13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 SPAG4Q9NPE6 437 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 LMCD1Q9NZU5 365 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 PCTPQ9UKL6 214 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 HS3ST2Q9Y278 367 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 FNDC3AQ9Y2H6 1198 aaKnown RBP13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 MED16Q9Y2X0 877 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 PPIL1Q9Y3C6 166 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 DNAJC15Q9Y5T4 150 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 COL4A6Q14031 1691 aa13.33□□□□□ -0.28
SSR4P1-201ENST00000415143 CACNA1HO95180 2353 aa13.32□□□□□ -0.28
SSR4P1-201ENST00000415143 MAGEA13PA6NCF6 341 aa13.32□□□□□ -0.28
SSR4P1-201ENST00000415143 IFRD1O00458 451 aaPredicted RBP13.32□□□□□ -0.28
SSR4P1-201ENST00000415143 PIP5K1BO14986 540 aa13.32□□□□□ -0.28
SSR4P1-201ENST00000415143 KPNA5O15131 536 aa13.32□□□□□ -0.28
SSR4P1-201ENST00000415143 OR1I1O60431 355 aa13.32□□□□□ -0.28
SSR4P1-201ENST00000415143 SIX3O95343 332 aaPredicted RBP13.32□□□□□ -0.28
SSR4P1-201ENST00000415143 MT-CO1P00395 513 aa13.32□□□□□ -0.28
SSR4P1-201ENST00000415143 OTCP00480 354 aa13.32□□□□□ -0.28
SSR4P1-201ENST00000415143 PRSS56P0CW18 603 aa13.32□□□□□ -0.28
SSR4P1-201ENST00000415143 SRCP12931 536 aa13.32□□□□□ -0.28
SSR4P1-201ENST00000415143 MSH3P20585 1137 aa13.32□□□□□ -0.28
SSR4P1-201ENST00000415143 HNF1BP35680 557 aa13.32□□□□□ -0.28
SSR4P1-201ENST00000415143 NSG1P42857 185 aa13.32□□□□□ -0.28
SSR4P1-201ENST00000415143 EPHA5P54756 1037 aa13.32□□□□□ -0.28
SSR4P1-201ENST00000415143 BLMHQ13867 455 aa13.32□□□□□ -0.28
SSR4P1-201ENST00000415143 SETMARQ53H47 684 aaPredicted RBP13.32□□□□□ -0.28
SSR4P1-201ENST00000415143 RARS2Q5T160 578 aaKnown RBP13.32□□□□□ -0.28
SSR4P1-201ENST00000415143 SULT1C3Q6IMI6 304 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms