RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 MYL2P10916 166 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 RALBP11234 206 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 FGF3P11487 239 aaPredicted RBP6.56□□□□□ -1.36
VPS41-204ENST00000413141 CPA3P15088 417 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 ITGB6P18564 788 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 MSH3P20585 1137 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 BGNP21810 368 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 DRD4P21917 467 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 TEAD1P28347 426 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 ALDH3A1P30838 453 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 SKIV2L2P42285 1042 aaKnown RBP6.56□□□□□ -1.36
VPS41-204ENST00000413141 GPR1P46091 355 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 PRLHRP49683 370 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 TPMTP51580 245 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 IL2P60568 153 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 ATP6V0D1P61421 351 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 PPP2CBP62714 309 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 PPP2CAP67775 309 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 SFSWAPQ12872 951 aaKnown RBP6.56□□□□□ -1.36
VPS41-204ENST00000413141 GAS6Q14393 721 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 IRF4Q15306 451 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 CHI3L2Q15782 390 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 WSCD2Q2TBF2 565 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 MAP7D1Q3KQU3 841 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 ZNF648Q5T619 568 aaPredicted RBP6.56□□□□□ -1.36
VPS41-204ENST00000413141 TRIM67Q6ZTA4 783 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 TRIM74Q86UV6 250 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 FAM124AQ86V42 546 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 HEATR4Q86WZ0 1026 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 HORMAD1Q86X24 394 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 NUDCD3Q8IVD9 361 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 C10orf107Q8IVU9 208 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 TRIM42Q8IWZ5 723 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 LRRC34Q8IZ02 419 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 NKAPQ8N5F7 415 aaKnown RBP6.56□□□□□ -1.36
VPS41-204ENST00000413141 ZBTB2Q8N680 514 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 RASGEF1AQ8N9B8 481 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 TP53I13Q8NBR0 393 aaPredicted RBP6.56□□□□□ -1.36
VPS41-204ENST00000413141 PLA2G15Q8NCC3 412 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 RHEBL1Q8TAI7 183 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 ZNF75CPQ92670 426 aaPredicted RBP6.56□□□□□ -1.36
VPS41-204ENST00000413141 PTERQ96BW5 349 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 LINGO1Q96FE5 620 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 COX14Q96I36 57 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 TSSK1BQ9BXA7 367 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 C1QTNF2Q9BXJ5 285 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 OSBPL6Q9BZF3 934 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 ZCCHC2Q9C0B9 1178 aaKnown RBP6.56□□□□□ -1.36
VPS41-204ENST00000413141 KDM4CQ9H3R0 1056 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 ALG9Q9H6U8 611 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 MANSC1Q9H8J5 431 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 TBC1D17Q9HA65 648 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 LMAN1LQ9HAT1 526 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 SPATS2LQ9NUQ6 558 aaKnown RBP6.56□□□□□ -1.36
VPS41-204ENST00000413141 FGFR1OP2Q9NVK5 253 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 C2orf42Q9NWW7 574 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 IKZF3Q9UKT9 509 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 NCKAP1Q9Y2A7 1128 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 DHRS7Q9Y394 339 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 MYO10Q9HD67 2058 aa6.56□□□□□ -1.36
VPS41-204ENST00000413141 TBC1D3DA0A087WVF3 549 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 TBC1D3IA0A087WXS9 549 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 TBC1D3EA0A087X179 549 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 TBC1D3KA0A087X1G2 549 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 CCDC189A1A4V9 331 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 TBC1D3FA6NER0 549 aaPredicted RBP6.55□□□□□ -1.36
VPS41-204ENST00000413141 OR2AG2A6NM03 316 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 FAM170BA6NMN3 283 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 A8MT66 165 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 C10orf142B7Z368 130 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 TBC1D3LB9A6J9 549 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 F8W8V4 182 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 EIF3FO00303 357 aaPredicted RBP6.55□□□□□ -1.36
VPS41-204ENST00000413141 BTN3A1O00481 513 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 RAD51BO15315 384 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 EDF1O60869 148 aaKnown RBP6.55□□□□□ -1.36
VPS41-204ENST00000413141 KERAO60938 352 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 ATG13O75143 517 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 SNNO75324 88 aaPredicted RBP6.55□□□□□ -1.36
VPS41-204ENST00000413141 H2AFYO75367 372 aaKnown RBP6.55□□□□□ -1.36
VPS41-204ENST00000413141 FAM107AO95990 144 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 FTH1P02794 183 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 SERPINE1P05121 402 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 VIMP08670 466 aaKnown RBP6.55□□□□□ -1.36
VPS41-204ENST00000413141 TBC1D3HP0C7X1 549 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 NEFHP12036 1026 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 AOAHP28039 575 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 CCR7P32248 378 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 ACSL1P33121 698 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 IGFALSP35858 605 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 RGS4P49798 205 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 CTSCP53634 463 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 CDK3Q00526 305 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 NFKB2Q00653 900 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 BST1Q10588 318 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 TMEM115Q12893 351 aaPredicted RBP6.55□□□□□ -1.36
VPS41-204ENST00000413141 BOP1Q14137 746 aaKnown RBP6.55□□□□□ -1.36
VPS41-204ENST00000413141 GBX1Q14549 363 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 OR4D1Q15615 310 aa6.55□□□□□ -1.36
VPS41-204ENST00000413141 TTLL9Q3SXZ7 439 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms