RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 ACTL8Q9H568 366 aa16.41■□□□□ 0.22
MRPL55-220ENST00000411464 CTTNBP2NLQ9P2B4 639 aa16.41■□□□□ 0.22
MRPL55-220ENST00000411464 ZNF711Q9Y462 761 aa16.41■□□□□ 0.22
MRPL55-220ENST00000411464 USP9YO00507 2555 aaPredicted RBP16.4■□□□□ 0.22
MRPL55-220ENST00000411464 A0A1W2PQJ5 194 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 PROSCO94903 275 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 MBD3O95983 291 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 BPIP17213 487 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 ARL4DP49703 201 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 TAS2R40P59535 323 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 RPS15P62841 145 aaKnown RBP16.4■□□□□ 0.22
MRPL55-220ENST00000411464 CDK18Q07002 472 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 AP1B1Q10567 949 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 ZBTB17Q13105 803 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 TUBB3Q13509 450 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 GTF2H3Q13889 308 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 FHL5Q5TD97 284 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 KLHL35Q6PF15 583 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 TRAPPC5Q8IUR0 188 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 THAP4Q8WY91 577 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 UBXN4Q92575 508 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 IMP4Q96G21 291 aaKnown RBP16.4■□□□□ 0.22
MRPL55-220ENST00000411464 AGAP3Q96P47 875 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 RNF157Q96PX1 679 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 SRPK1Q96SB4 655 aaKnown RBP16.4■□□□□ 0.22
MRPL55-220ENST00000411464 CEP41Q9BYV8 373 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 XPO4Q9C0E2 1151 aaKnown RBP16.4■□□□□ 0.22
MRPL55-220ENST00000411464 BRD8Q9H0E9 1235 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 HEY1Q9Y5J3 304 aa16.4■□□□□ 0.22
MRPL55-220ENST00000411464 TEX15Q9BXT5 2789 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 DNAJB5O75953 348 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 TIAF1O95411 115 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 PDGFAP04085 211 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 FOLR1P15328 257 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 GNLYP22749 145 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 UQCRFS1P47985 274 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 PGDP52209 483 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 PDE1BQ01064 536 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 TMEM115Q12893 351 aaPredicted RBP16.39■□□□□ 0.21
MRPL55-220ENST00000411464 PWWP2BQ6NUJ5 590 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 CPNE8Q86YQ8 564 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 GALNT11Q8NCW6 608 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 CPT1CQ8TCG5 803 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 BRSK1Q8TDC3 778 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 CPLX3Q8WVH0 158 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 SLC41A2Q96JW4 573 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 VPS35Q96QK1 796 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 SLC25A51Q9H1U9 297 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 CBX8Q9HC52 389 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 UVRAGQ9P2Y5 699 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 LCMT1Q9UIC8 334 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 WDR37Q9Y2I8 494 aa16.39■□□□□ 0.21
MRPL55-220ENST00000411464 IGHV5-51A0A0C4DH38 117 aa16.38■□□□□ 0.21
MRPL55-220ENST00000411464 KCNJ13O60928 360 aa16.38■□□□□ 0.21
MRPL55-220ENST00000411464 FECHP22830 423 aa16.38■□□□□ 0.21
MRPL55-220ENST00000411464 KDELR1P24390 212 aa16.38■□□□□ 0.21
MRPL55-220ENST00000411464 PTPN4P29074 926 aa16.38■□□□□ 0.21
MRPL55-220ENST00000411464 ZBED6P86452 979 aa16.38■□□□□ 0.21
MRPL55-220ENST00000411464 ACY1Q03154 408 aa16.38■□□□□ 0.21
MRPL55-220ENST00000411464 KCNAB1Q14722 419 aa16.38■□□□□ 0.21
MRPL55-220ENST00000411464 PDK1Q15118 436 aa16.38■□□□□ 0.21
MRPL55-220ENST00000411464 UGT8Q16880 541 aa16.38■□□□□ 0.21
MRPL55-220ENST00000411464 KHDC1Q4VXA5 237 aaKnown RBP16.38■□□□□ 0.21
MRPL55-220ENST00000411464 FAM199XQ6PEV8 388 aaPredicted RBP16.38■□□□□ 0.21
MRPL55-220ENST00000411464 AMZ2Q86W34 360 aa16.38■□□□□ 0.21
MRPL55-220ENST00000411464 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.38■□□□□ 0.21
MRPL55-220ENST00000411464 RAPGEF5Q92565 580 aa16.38■□□□□ 0.21
MRPL55-220ENST00000411464 SLC25A23Q9BV35 468 aa16.38■□□□□ 0.21
MRPL55-220ENST00000411464 MAK16Q9BXY0 300 aaKnown RBP16.38■□□□□ 0.21
MRPL55-220ENST00000411464 TRIM55Q9BYV6 548 aa16.38■□□□□ 0.21
MRPL55-220ENST00000411464 BPIFA1Q9NP55 256 aa16.38■□□□□ 0.21
MRPL55-220ENST00000411464 SEMA5BQ9P283 1151 aa16.38■□□□□ 0.21
MRPL55-220ENST00000411464 LRRD1A4D1F6 860 aa16.37■□□□□ 0.21
MRPL55-220ENST00000411464 NDST3O95803 873 aa16.37■□□□□ 0.21
MRPL55-220ENST00000411464 CCL11P51671 97 aa16.37■□□□□ 0.21
MRPL55-220ENST00000411464 PPP1CAP62136 330 aa16.37■□□□□ 0.21
MRPL55-220ENST00000411464 PLCL1Q15111 1095 aa16.37■□□□□ 0.21
MRPL55-220ENST00000411464 ATP13A5Q4VNC0 1218 aa16.37■□□□□ 0.21
MRPL55-220ENST00000411464 FAM182AQ5T1J6 154 aa16.37■□□□□ 0.21
MRPL55-220ENST00000411464 CAPRIN2Q6IMN6 1127 aaKnown RBP16.37■□□□□ 0.21
MRPL55-220ENST00000411464 C11orf96Q7Z7L8 435 aa16.37■□□□□ 0.21
MRPL55-220ENST00000411464 SYVN1Q86TM6 617 aa16.37■□□□□ 0.21
MRPL55-220ENST00000411464 KMT5CQ86Y97 462 aa16.37■□□□□ 0.21
MRPL55-220ENST00000411464 PLD5Q8N7P1 536 aa16.37■□□□□ 0.21
MRPL55-220ENST00000411464 RUFY1Q96T51 708 aa16.37■□□□□ 0.21
MRPL55-220ENST00000411464 AKIRIN1Q9H9L7 192 aaPredicted RBP16.37■□□□□ 0.21
MRPL55-220ENST00000411464 ACSS2Q9NR19 701 aa16.37■□□□□ 0.21
MRPL55-220ENST00000411464 FGF21Q9NSA1 209 aa16.37■□□□□ 0.21
MRPL55-220ENST00000411464 PLEKHB1Q9UF11 243 aaPredicted RBP16.37■□□□□ 0.21
MRPL55-220ENST00000411464 TMPRSS11EQ9UL52 423 aa16.37■□□□□ 0.21
MRPL55-220ENST00000411464 LUC7L2Q9Y383 392 aaKnown RBP16.37■□□□□ 0.21
MRPL55-220ENST00000411464 UTP20O75691 2785 aaKnown RBP16.37■□□□□ 0.21
MRPL55-220ENST00000411464 UBA6A0AVT1 1052 aaPredicted RBP16.36■□□□□ 0.21
MRPL55-220ENST00000411464 AURKAO14965 403 aa16.36■□□□□ 0.21
MRPL55-220ENST00000411464 PPP1R12AO14974 1030 aaPredicted RBP16.36■□□□□ 0.21
MRPL55-220ENST00000411464 MT-CYBP00156 380 aaPredicted RBP16.36■□□□□ 0.21
MRPL55-220ENST00000411464 H2AFZP0C0S5 128 aa16.36■□□□□ 0.21
MRPL55-220ENST00000411464 EBLN1P0CF75 366 aa16.36■□□□□ 0.21
MRPL55-220ENST00000411464 RPS18P62269 152 aaKnown RBP16.36■□□□□ 0.21
MRPL55-220ENST00000411464 HSD11B2P80365 405 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms