RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 SLC12A8A0AV02 714 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZNF729A6NN14 1252 aaPredicted RBP-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 FAM166BA8MTA8 275 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 KPNA7A9QM74 516 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 K7EMT4 169 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 SOCS3O14543 225 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 RRHO14718 337 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 FYB1O15117 783 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 BET1O15155 118 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 TEX33O43247 280 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 DLX3O60479 287 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 CELF2O95319 508 aaKnown RBP-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 GLP2RO95838 553 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 IGKV1D-33P01593 117 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 IGKV1-33P01594 117 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 IGHDP01880 384 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 GBAP04062 536 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 ADRA2AP08913 450 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 BRAFP15056 766 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 CPN1P15169 458 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 CTRB1P17538 263 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 ITGAXP20702 1163 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 PDCP20941 246 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 AGXTP21549 392 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 ACHEP22303 614 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 GPX3P22352 226 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 CTSSP25774 331 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 DUSP1P28562 367 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 CD40LGP29965 261 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 HOXA6P31267 233 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 SLC6A9P48067 706 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 CSNK1DP48730 415 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 TPMTP51580 245 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 SUOXP51687 545 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 STX17P56962 302 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 DCDC1P59894 354 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 QRFPP83859 136 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 ARHGAP8P85298 464 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZBED6P86452 979 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 PLCB2Q00722 1185 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 XPCQ01831 940 aaPredicted RBP-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 RELQ04864 619 aaPredicted RBP-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 PRKCDQ05655 676 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 OVGP1Q12889 678 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 IL15RAQ13261 267 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 UBE4AQ14139 1066 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 ARHGEF6Q15052 776 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 SMAD1Q15797 465 aaKnown RBP-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 NTRK3Q16288 839 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 CYP1B1Q16678 543 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 SOWAHAQ2M3V2 549 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 ARMC4Q5T2S8 1044 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 KLHDC7AQ5VTJ3 777 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 FBXW10Q5XX13 1052 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 GRHL2Q6ISB3 625 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 CLEC18BQ6UXF7 455 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 MSANTD1Q6ZTZ1 278 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 FAM220AQ7Z4H9 259 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 DNAJB7Q7Z6W7 309 aaPredicted RBP-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 LINC01551Q86U37 167 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 PROSER2Q86WR7 435 aaPredicted RBP-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 ARL17AQ8IVW1 177 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 ANKRD13AQ8IZ07 590 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 FAM47BQ8NA70 645 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 TDRD5Q8NAT2 981 aaKnown RBP-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 FAM184AQ8NB25 1140 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 GSTCDQ8NEC7 633 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 NLGN4YQ8NFZ3 816 aaPredicted RBP-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 OR7D4Q8NG98 312 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 SNRNP27Q8WVK2 155 aaKnown RBP-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 DLX4Q92988 240 aaPredicted RBP-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 LINGO1Q96FE5 620 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 TIMM17AQ99595 171 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 TTC1Q99614 292 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 PKMYT1Q99640 499 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 SMOQ99835 787 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 SYT15Q9BQS2 421 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 OVOL2Q9BRP0 275 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 MYL10Q9BUA6 226 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 MSTO1Q9BUK6 570 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 DPCDQ9BVM2 203 aaPredicted RBP-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 SORBS1Q9BX66 1292 aaKnown RBP-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 FUT8Q9BYC5 575 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 TANGO6Q9C0B7 1094 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 SEMA6AQ9H2E6 1030 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 ST6GALNAC1Q9NSC7 600 aaPredicted RBP-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 UBQLN2Q9UHD9 624 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 GGA2Q9UJY4 613 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 PRDM4Q9UKN5 801 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 ELF5Q9UKW6 265 aaPredicted RBP-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZNF215Q9UL58 517 aaPredicted RBP-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 TPCN1Q9ULQ1 816 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 ABCG2Q9UNQ0 655 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 MOKQ9UQ07 419 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 ZNF443Q9Y2A4 671 aaPredicted RBP-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 PCDHA1Q9Y5I3 950 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 ARAP3Q8WWN8 1544 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 CHD4Q14839 1912 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 USP31Q70CQ4 1352 aa-1.62□□□□□ -2.67
RNU4-88P-201ENST00000411220 MYO9BQ13459 2157 aa-1.62□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms