RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 MARCOQ9UEW3 520 aaPredicted RBP12.29□□□□□ -0.44
CHMP3-204ENST00000409727 FBXL21Q9UKT6 434 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 DHRS7Q9Y394 339 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 KLF11O14901 512 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 TRIM13O60858 407 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 TSPAN12O95859 305 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 SERPINE1P05121 402 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 NDUFV2P19404 249 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 MAT2AP31153 395 aaKnown RBP12.29□□□□□ -0.44
CHMP3-204ENST00000409727 SLC1A6P48664 564 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 BOP1Q14137 746 aaKnown RBP12.29□□□□□ -0.44
CHMP3-204ENST00000409727 TSNQ15631 228 aaKnown RBP12.29□□□□□ -0.44
CHMP3-204ENST00000409727 TTC31Q49AM3 519 aaPredicted RBP12.29□□□□□ -0.44
CHMP3-204ENST00000409727 TMEM31Q5JXX7 168 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 LIPMQ5VYY2 423 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 PHYKPLQ8IUZ5 450 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 ZBTB2Q8N680 514 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 CCNYL1Q8N7R7 359 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 DDHD1Q8NEL9 900 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 SREK1Q8WXA9 508 aaKnown RBP12.29□□□□□ -0.44
CHMP3-204ENST00000409727 INPP5DQ92835 1189 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 MSANTD3Q96H12 275 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 LENG8Q96PV6 779 aaPredicted RBP12.29□□□□□ -0.44
CHMP3-204ENST00000409727 ARHGEF3Q9NR81 526 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 SPATS2LQ9NUQ6 558 aaKnown RBP12.29□□□□□ -0.44
CHMP3-204ENST00000409727 RNF112Q9ULX5 631 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 MMP17Q9ULZ9 603 aa12.29□□□□□ -0.44
CHMP3-204ENST00000409727 TBC1D3DA0A087WVF3 549 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 TBC1D3IA0A087WXS9 549 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 TBC1D3EA0A087X179 549 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 TBC1D3KA0A087X1G2 549 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 TBC1D3FA6NER0 549 aaPredicted RBP12.28□□□□□ -0.44
CHMP3-204ENST00000409727 NCF1BA6NI72 391 aaPredicted RBP12.28□□□□□ -0.44
CHMP3-204ENST00000409727 NCF1CA8MVU1 366 aaPredicted RBP12.28□□□□□ -0.44
CHMP3-204ENST00000409727 SUPT3HB4E1H0 165 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 TBC1D3LB9A6J9 549 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 UBXN8O00124 270 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 MAN2B1O00754 1011 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 AP1G1O43747 822 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 SUPT3HO75486 399 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 PAK4O96013 591 aaPredicted RBP12.28□□□□□ -0.44
CHMP3-204ENST00000409727 TBC1D3HP0C7X1 549 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 NCF1P14598 390 aaPredicted RBP12.28□□□□□ -0.44
CHMP3-204ENST00000409727 CD9P21926 228 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 ARRB2P32121 409 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 CCR7P32248 378 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 CCR10P46092 362 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 NAGLUP54802 743 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 ADPRHP54922 357 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 UBXN2BQ14CS0 331 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 CRY1Q16526 586 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 ACSBG2Q5FVE4 666 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 LDLRAP1Q5SW96 308 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 TBC1D3GQ6DHY5 549 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 TBC1D3CQ6IPX1 549 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 SPATA21Q7Z572 469 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 PIGWQ7Z7B1 504 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 ADHFE1Q8IWW8 467 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 TBC1D3Q8IZP1 549 aaPredicted RBP12.28□□□□□ -0.44
CHMP3-204ENST00000409727 CACNA2D3Q8IZS8 1091 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 PGBD3Q8N328 593 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 RASGEF1AQ8N9B8 481 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 RAB3IL1Q8TBN0 382 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 AGR3Q8TD06 166 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 VPS35Q96QK1 796 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 PANX3Q96QZ0 392 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 FBRSQ9HAH7 460 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 UTP6Q9NYH9 597 aaKnown RBP12.28□□□□□ -0.44
CHMP3-204ENST00000409727 DCTN4Q9UJW0 460 aa12.28□□□□□ -0.44
CHMP3-204ENST00000409727 CNOT6Q9ULM6 557 aaKnown RBP12.28□□□□□ -0.44
CHMP3-204ENST00000409727 ZFR2Q9UPR6 939 aaKnown RBP12.28□□□□□ -0.44
CHMP3-204ENST00000409727 A0A1W2PQU0 124 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 KRBA1A5PL33 1030 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 A8MT66 165 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 PLRG1O43660 514 aaKnown RBP12.27□□□□□ -0.44
CHMP3-204ENST00000409727 SNX3O60493 162 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 SNNO75324 88 aaPredicted RBP12.27□□□□□ -0.44
CHMP3-204ENST00000409727 HSPA4LO95757 839 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 CHRNB1P11230 501 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 ATP5F1P24539 256 aaPredicted RBP12.27□□□□□ -0.44
CHMP3-204ENST00000409727 TARSP26639 723 aaKnown RBP12.27□□□□□ -0.44
CHMP3-204ENST00000409727 PBLDP30039 288 aaPredicted RBP12.27□□□□□ -0.44
CHMP3-204ENST00000409727 CTSCP53634 463 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 ABCE1P61221 599 aaKnown RBP12.27□□□□□ -0.44
CHMP3-204ENST00000409727 ATP6V0D1P61421 351 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 CREB5Q02930 508 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 ZP2Q05996 745 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 HSPA14Q0VDF9 509 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 TMEM115Q12893 351 aaPredicted RBP12.27□□□□□ -0.44
CHMP3-204ENST00000409727 FBXO48Q5FWF7 155 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 ATG14Q6ZNE5 492 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 RPS27LQ71UM5 84 aaKnown RBP12.27□□□□□ -0.44
CHMP3-204ENST00000409727 RAVER1Q8IY67 606 aaKnown RBP12.27□□□□□ -0.44
CHMP3-204ENST00000409727 STAG3L4Q8TBR4 150 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 DTX3LQ8TDB6 740 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 SKA2Q8WVK7 121 aaPredicted RBP12.27□□□□□ -0.44
CHMP3-204ENST00000409727 KIAA1191Q96A73 305 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 MYOCQ99972 504 aa12.27□□□□□ -0.44
CHMP3-204ENST00000409727 GATA5Q9BWX5 397 aaPredicted RBP12.27□□□□□ -0.44
CHMP3-204ENST00000409727 SHCBP1LQ9BZQ2 653 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms