RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 ANKRD22Q5VYY1 191 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 HIST3H2AQ7L7L0 130 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 GRASPQ7Z6J2 395 aaPredicted RBP16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 KBTBD6Q86V97 674 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 CYP4X1Q8N118 509 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 ZNF276Q8N554 614 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 DHRSXQ8N5I4 330 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 HIST1H2ACQ93077 130 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 COL26A1Q96A83 441 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 ZFYVE19Q96K21 471 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 IPPKQ9H8X2 491 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 FBRSQ9HAH7 460 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 DDX28Q9NUL7 540 aaKnown RBP16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 MYH13Q9UKX3 1938 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 KLHL33A6NCF5 533 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 H0Y858 1186 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 AHCYL1O43865 530 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 DLDP09622 509 aaKnown RBP16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 HOXA11P31270 313 aaPredicted RBP16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 TEAD2Q15562 447 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 DPY19L1Q2PZI1 675 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 NETO2Q8NC67 525 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 LRRC15Q8TF66 581 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 PRDM8Q9NQV8 689 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 DDX18Q9NVP1 670 aaKnown RBP16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 MAGEL2Q9UJ55 1249 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 LYPLA1O75608 230 aaPredicted RBP16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 HLA-DQB2P05538 268 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 EPORP19235 508 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 GSTT1P30711 240 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 TMED10P49755 219 aaKnown RBP16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 CLCQ05315 142 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 TOP3AQ13472 1001 aaPredicted RBP16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 ATXN7L2Q5T6C5 722 aaPredicted RBP16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 GLB1L3Q8NCI6 653 aaPredicted RBP16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 PCDH12Q9NPG4 1184 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 ZNF490Q9ULM2 529 aaPredicted RBP16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 M0QZQ0 153 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 MAN2B1O00754 1011 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 SMNDC1O75940 238 aaKnown RBP eCLIP16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 TYRP14679 529 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 HNRNPLP14866 589 aaKnown RBP eCLIP16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 KIR3DL1P43629 444 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 KCNQ1P51787 676 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 FGD3Q5JSP0 725 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 TMPRSS11BQ86T26 416 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 STK32CQ86UX6 486 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 UMODL1-AS1Q8N2C9 162 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 DCAKDQ8WVC6 231 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 CDKN2AIPNLQ96HQ2 116 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 TEFMQ96QE5 360 aaKnown RBP16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 CAB39LQ9H9S4 337 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 USP29Q9HBJ7 922 aa16.62■□□□□ 0.25
PCDHA13-202ENST00000409494 VAV1P15498 845 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 ATXN1P54253 815 aaKnown RBP16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 PDK3Q15120 406 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 C22orf39Q6P5X5 142 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 RTKNQ9BST9 563 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 EFCAB11Q9BUY7 163 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 ENO2P09104 434 aaPredicted RBP16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 CTSAP10619 480 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 CDH3P22223 829 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 HNF4AP41235 474 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 USP39Q53GS9 565 aaKnown RBP16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 XKR4Q5GH76 650 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 NEK5Q6P3R8 708 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 BTBD1Q9H0C5 482 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 TMEM245Q9H330 911 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 AP3D1O14617 1153 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 PRMT3O60678 531 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 ERAL1O75616 437 aaKnown RBP16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 PRDX6P30041 224 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 SOX6P35712 828 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 PRKAG1P54619 331 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 SLC10A7Q0GE19 358 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 SCAPQ12770 1279 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 SH3PXD2AQ5TCZ1 1133 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 HFE2Q6ZVN8 426 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 C19orf60Q96EN9 201 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 FIZ1Q96SL8 496 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 POLR1BQ9H9Y6 1135 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 POLR3BQ9NW08 1133 aaPredicted RBP16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 TIAM2Q8IVF5 1701 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 SLC22A2O15244 555 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 HMGB3O15347 200 aaKnown RBP16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 SERPINB1P30740 379 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 CDH13P55290 713 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 CCNYL2Q5T2Q4 361 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 GPR156Q8NFN8 814 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 CCM2Q9BSQ5 444 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 SEMA6AQ9H2E6 1030 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 CALML5Q9NZT1 146 aa16.61■□□□□ 0.25
PCDHA13-202ENST00000409494 A0A087WXM4 84 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 ANKRD66B4E2M5 251 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 NRP2O60462 931 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 AP2A2O94973 939 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 SLC18A1P54219 525 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 MANFP55145 182 aaKnown RBP16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 BIKQ13323 160 aa16.6■□□□□ 0.25
PCDHA13-202ENST00000409494 CNTD1Q8N815 330 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 335.2 ms