RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 SLC22A15Q8IZD6 547 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 TCAIMQ8N3R3 496 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 APPL2Q8NEU8 664 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 OR5K1Q8NHB7 308 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 CNIH3Q8TBE1 160 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 L3HYPDHQ96EM0 354 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 C8orf48Q96LL4 319 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 C2orf49Q9BVC5 232 aaPredicted RBP5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 MIR1-1HGQ9H1L0 117 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 GSTO2Q9H4Y5 243 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 SMURF2Q9HAU4 748 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 CYP4F12Q9HCS2 524 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 TNFRSF12AQ9NP84 129 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 FAM198AQ9UFP1 575 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 ERVW-1Q9UQF0 538 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 CTDSP2O14595 271 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 NOBOXO60393 691 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 RPS6KA4O75676 772 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 HOXC6P09630 235 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 MYCLP12524 364 aaPredicted RBP5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 GOT1P17174 413 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 GNPDA1P46926 289 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 CDH17Q12864 832 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 ORC1Q13415 861 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 KEAP1Q14145 624 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 RCAN2Q14206 197 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 MTERF2Q49AM1 385 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 NOL9Q5SY16 702 aaKnown RBP5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 CERCAMQ5T4B2 595 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 PIK3R6Q5UE93 754 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 CYHR1Q6ZMK1 362 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 HDDC2Q7Z4H3 204 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 SPATA19Q7Z5L4 167 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 B3GNT8Q7Z7M8 397 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 NLGN4XQ8N0W4 816 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 PAF1Q8N7H5 531 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 ZNF540Q8NDQ6 660 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 ST13P5Q8NFI4 369 aaPredicted RBP5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 CENPIQ92674 756 aaPredicted RBP5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 SNAPC3Q92966 411 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 POP5Q969H6 163 aaKnown RBP5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 KIFC1Q9BW19 673 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 MRIQ9BWK5 157 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 MRPL4Q9BYD3 311 aaKnown RBP5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 ZNF556Q9HAH1 456 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 IGSF5Q9NSI5 407 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 POLR3BQ9NW08 1133 aaPredicted RBP5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 TMEM45AQ9NWC5 275 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 ABI2Q9NYB9 513 aaPredicted RBP5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 ZMAT5Q9UDW3 170 aaKnown RBP5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 STOML2Q9UJZ1 356 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 CPSF3Q9UKF6 684 aaKnown RBP5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 MAGED1Q9Y5V3 778 aaPredicted RBP5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 A0A0X1KG70 313 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 MEIOCA2RUB1 952 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 NEMP2A6NFY4 417 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 NFIBO00712 420 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 B4GALT4O60513 344 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 OR7A10O76100 309 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 MT-CO1P00395 513 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 LTA4HP09960 611 aaKnown RBP5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 BDNFP23560 247 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 NMBRP28336 390 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 TIE1P35590 1138 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 ARL2P36404 184 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 MLLT3P42568 568 aaPredicted RBP5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 PPP3CCP48454 512 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 CDH8P55286 799 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 ZNF460Q14592 562 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 ACAP2Q15057 778 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 LRRC26Q2I0M4 334 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 BCL7AQ4VC05 210 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 NXNL2Q5VZ03 156 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 KCTD11Q693B1 232 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 TIGD3Q6B0B8 471 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 NAPEPLDQ6IQ20 393 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 CREB3L2Q70SY1 520 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 PDZD4Q76G19 769 aaPredicted RBP5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 HIPK1Q86Z02 1210 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 SPATA6LQ8N4H0 392 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 SYTL5Q8TDW5 730 aaPredicted RBP5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 SLC7A6Q92536 515 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 RPL3LQ92901 407 aaKnown RBP5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 TMEM143Q96AN5 459 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 GPRASP2Q96D09 838 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 RPL10LQ96L21 214 aaKnown RBP5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 CEP19Q96LK0 163 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 C3orf30Q96M34 536 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 TRAF4Q9BUZ4 470 aaPredicted RBP5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 LIN7BQ9HAP6 207 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 SLC52A3Q9NQ40 469 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 ITM2CQ9NQX7 267 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 AASDHPPTQ9NRN7 309 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 SETD4Q9NVD3 440 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 TSPAN16Q9UKR8 245 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 POLHQ9Y253 713 aa5.78□□□□□ -1.48
R3HDM1-202ENST00000409478 UNCXA6NJT0 531 aa5.77□□□□□ -1.49
R3HDM1-202ENST00000409478 POLRMTO00411 1230 aaKnown RBP5.77□□□□□ -1.49
R3HDM1-202ENST00000409478 PSMD3O43242 534 aa5.77□□□□□ -1.49
R3HDM1-202ENST00000409478 SLITRK5O94991 958 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms