RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 COPS4Q9BT78 406 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 ZNF446Q9NWS9 450 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 TMED5Q9Y3A6 229 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 ICE1Q9Y2F5 2266 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 C5orf51A6NDU8 294 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 F8VP50 259 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 SLC33A1O00400 549 aaPredicted RBP12.04□□□□□ -0.48
SHANK2-203ENST00000409161 GNAZP19086 355 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 CYP4F8P98187 520 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 CSTF1Q05048 431 aaKnown RBP12.04□□□□□ -0.48
SHANK2-203ENST00000409161 ADGRE1Q14246 886 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 RD3Q7Z3Z2 195 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 C8orf48Q96LL4 319 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 FDXACB1Q9BRP7 624 aaPredicted RBP12.04□□□□□ -0.48
SHANK2-203ENST00000409161 KCTD5Q9NXV2 234 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 CACNB4O00305 520 aaPredicted RBP12.04□□□□□ -0.48
SHANK2-203ENST00000409161 HNRNPLP14866 589 aaKnown RBP eCLIP12.04□□□□□ -0.481e-8■■■■■ 37.6
SHANK2-203ENST00000409161 CXCR3P49682 368 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 TXNL4AP83876 142 aaKnown RBP12.04□□□□□ -0.48
SHANK2-203ENST00000409161 LCP2Q13094 533 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 PARP15Q460N3 678 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 DENND1CQ8IV53 801 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 RP2O75695 350 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 CNPY1Q3B7I2 92 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 SLC9B1Q4ZJI4 515 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 FBXO16Q8IX29 292 aaPredicted RBP12.04□□□□□ -0.48
SHANK2-203ENST00000409161 CYP4X1Q8N118 509 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 DCAKDQ8WVC6 231 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 NSMCE3Q96MG7 304 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 ABCB9Q9NP78 766 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 NKIRAS2Q9NYR9 191 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 FER1L6Q2WGJ9 1857 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 DEPDC5O75140 1603 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 HCN1O60741 890 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 AMHP03971 560 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 ARP10275 920 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 SSR2P43308 183 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 DCDC1P59894 354 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 BNIP1Q12981 228 aa12.04□□□□□ -0.48
SHANK2-203ENST00000409161 CYP3A7-CYP3A51PA0A087WV96 503 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 UBXN7O94888 489 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 CYP3A7P24462 503 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 ALG10Q5BKT4 473 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 SLC26A9Q7LBE3 791 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 OTOP1Q7RTM1 612 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 FAM83AQ86UY5 434 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 ANKFN1Q8N957 763 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 DNASE1L2Q92874 299 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 KNL1Q8NG31 2342 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 PDLIM1O00151 329 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 ENTPD6O75354 484 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 SH3BGRLO75368 114 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 C22orf31O95567 290 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 RAP2AP10114 183 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 HNRNPH3P31942 346 aaKnown RBP12.03□□□□□ -0.48
SHANK2-203ENST00000409161 SLC1A2P43004 574 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 OR3A3P47888 321 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 OR3A2P47893 321 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 PFKPQ01813 784 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 HSD17B12Q53GQ0 312 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 KLHL26Q53HC5 615 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 CLEC10AQ8IUN9 316 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 NATD1Q8N6N6 113 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 STOML3Q8TAV4 291 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 OSMRQ99650 979 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 RANBP3Q9H6Z4 567 aaPredicted RBP12.03□□□□□ -0.48
SHANK2-203ENST00000409161 TMEM9Q9P0T7 183 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 FBXO5Q9UKT4 447 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 RBMX2Q9Y388 322 aaKnown RBP12.03□□□□□ -0.48
SHANK2-203ENST00000409161 LMTK2Q8IWU2 1503 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 DDX6P26196 483 aaKnown RBP eCLIP12.03□□□□□ -0.48
SHANK2-203ENST00000409161 GRIA1P42261 906 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 NDUFA9Q16795 377 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 KCNK18Q7Z418 384 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 RIOX2Q8IUF8 465 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 PRELID2Q8N945 189 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 COPS8Q99627 209 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 AGXT2Q9BYV1 514 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 PCDHGC3Q9UN70 934 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 BTRCQ9Y297 605 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 USP12O75317 370 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 CCNHP51946 323 aaPredicted RBP12.03□□□□□ -0.48
SHANK2-203ENST00000409161 STXBP1P61764 594 aaKnown RBP12.03□□□□□ -0.48
SHANK2-203ENST00000409161 CPSF6Q16630 551 aaKnown RBP eCLIP12.03□□□□□ -0.48
SHANK2-203ENST00000409161 TIGD6Q17RP2 521 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 FAM183BPQ6ZVS7 135 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 PCDH19Q8TAB3 1148 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 PTPRUQ92729 1446 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 NUDT15Q9NV35 164 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 ATF5Q9Y2D1 282 aaPredicted RBP12.03□□□□□ -0.48
SHANK2-203ENST00000409161 LTN1O94822 1766 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 ATP6V1G1O75348 118 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 ELFN1P0C7U0 828 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 NR2C1P13056 603 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 KHKP50053 298 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 SLC5A3P53794 718 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 KAT2AQ92830 837 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 ZNF570Q96NI8 536 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 PRRG4Q9BZD6 226 aa12.03□□□□□ -0.48
SHANK2-203ENST00000409161 ZNF282Q9UDV7 671 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms