RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 FAM155BO75949 473 aa32.83■■■□□ 2.85
CSNK1E-204ENST00000403904 LMNAP02545 664 aaKnown RBP32.83■■■□□ 2.85
CSNK1E-204ENST00000403904 IVLP07476 585 aa32.83■■■□□ 2.85
CSNK1E-204ENST00000403904 GPR89BP0CG08 455 aa32.83■■■□□ 2.85
CSNK1E-204ENST00000403904 GNPDA1P46926 289 aa32.83■■■□□ 2.85
CSNK1E-204ENST00000403904 CD151P48509 253 aa32.83■■■□□ 2.85
CSNK1E-204ENST00000403904 GRIK2Q13002 908 aa32.83■■■□□ 2.85
CSNK1E-204ENST00000403904 KLHL38Q2WGJ6 581 aa32.83■■■□□ 2.85
CSNK1E-204ENST00000403904 PLA2G2CQ5R387 149 aa32.83■■■□□ 2.85
CSNK1E-204ENST00000403904 BEND6Q5SZJ8 279 aaPredicted RBP32.83■■■□□ 2.85
CSNK1E-204ENST00000403904 HNRNPLLQ8WVV9 542 aaKnown RBP32.83■■■□□ 2.85
CSNK1E-204ENST00000403904 ATXN7L3BQ96GX2 97 aa32.83■■■□□ 2.85
CSNK1E-204ENST00000403904 CPNE1Q99829 537 aa32.83■■■□□ 2.85
CSNK1E-204ENST00000403904 RMI1Q9H9A7 625 aa32.83■■■□□ 2.85
CSNK1E-204ENST00000403904 EXOC1LA0A1B0GW35 172 aa32.82■■■□□ 2.84
CSNK1E-204ENST00000403904 GRID2O43424 1007 aa32.82■■■□□ 2.84
CSNK1E-204ENST00000403904 SHBGP04278 402 aa32.82■■■□□ 2.84
CSNK1E-204ENST00000403904 NAB1Q13506 487 aa32.82■■■□□ 2.84
CSNK1E-204ENST00000403904 TCEAL2Q9H3H9 227 aaPredicted RBP32.82■■■□□ 2.84
CSNK1E-204ENST00000403904 POC1B-GALNT4F8VUJ3 575 aa32.81■■■□□ 2.84
CSNK1E-204ENST00000403904 RPS3P23396 243 aaKnown RBP eCLIP32.81■■■□□ 2.84
CSNK1E-204ENST00000403904 HK3P52790 923 aa32.81■■■□□ 2.84
CSNK1E-204ENST00000403904 ADARP55265 1226 aaKnown RBP32.81■■■□□ 2.84
CSNK1E-204ENST00000403904 IRX4P78413 519 aa32.81■■■□□ 2.84
CSNK1E-204ENST00000403904 PYCR3Q53H96 274 aa32.81■■■□□ 2.84
CSNK1E-204ENST00000403904 CTSL3PQ5NE16 218 aa32.81■■■□□ 2.84
CSNK1E-204ENST00000403904 TCEAL6Q6IPX3 200 aa32.81■■■□□ 2.84
CSNK1E-204ENST00000403904 ZNF549Q6P9A3 640 aa32.81■■■□□ 2.84
CSNK1E-204ENST00000403904 GALNT13Q8IUC8 556 aa32.81■■■□□ 2.84
CSNK1E-204ENST00000403904 TCEAL3Q969E4 200 aa32.81■■■□□ 2.84
CSNK1E-204ENST00000403904 ZNF514Q96K75 400 aaPredicted RBP32.81■■■□□ 2.84
CSNK1E-204ENST00000403904 TM7SF3Q9NS93 570 aa32.81■■■□□ 2.84
CSNK1E-204ENST00000403904 GPR34Q9UPC5 381 aa32.81■■■□□ 2.84
CSNK1E-204ENST00000403904 GPSM3Q9Y4H4 160 aa32.81■■■□□ 2.84
CSNK1E-204ENST00000403904 DGKBQ9Y6T7 804 aa32.81■■■□□ 2.84
CSNK1E-204ENST00000403904 AP2A2O94973 939 aa32.8■■■□□ 2.84
CSNK1E-204ENST00000403904 TNFP01375 233 aa32.8■■■□□ 2.84
CSNK1E-204ENST00000403904 GP5P40197 560 aa32.8■■■□□ 2.84
CSNK1E-204ENST00000403904 PTRHD1Q6GMV3 140 aaKnown RBP32.8■■■□□ 2.84
CSNK1E-204ENST00000403904 LRRTM4Q86VH4 590 aa32.8■■■□□ 2.84
CSNK1E-204ENST00000403904 ZC3HC1Q86WB0 502 aaKnown RBP32.8■■■□□ 2.84
CSNK1E-204ENST00000403904 MCMBPQ9BTE3 642 aa32.8■■■□□ 2.84
CSNK1E-204ENST00000403904 NUSAP1Q9BXS6 441 aaKnown RBP32.8■■■□□ 2.84
CSNK1E-204ENST00000403904 GNPTGQ9UJJ9 305 aa32.8■■■□□ 2.84
CSNK1E-204ENST00000403904 IQCF5A8MTL0 148 aa32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 RASGRP1O95267 797 aa32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 ESR1P03372 595 aa32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 CSF2P04141 144 aa32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 OR56A5P0C7T3 313 aa32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 JUNDP17535 347 aa32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 PRLHRP49683 370 aa32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 PLA2G4EQ3MJ16 856 aa32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 PHACTR4Q8IZ21 702 aa32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 PAFAH2Q99487 392 aa32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 ERVMER34-1Q9H9K5 563 aa32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 PCDHB1Q9Y5F3 818 aa32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 PCDH15Q96QU1 1955 aa32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 KHNYNO15037 678 aaKnown RBP32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 PKMP14618 531 aaKnown RBP32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 TCEA2Q15560 299 aa32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 BCL7AQ4VC05 210 aa32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 CHST15Q7LFX5 561 aaPredicted RBP32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 SLC44A1Q8WWI5 657 aa32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 NDNQ99608 321 aa32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 CCDC68Q9H2F9 335 aa32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 PLEKHM1Q9Y4G2 1056 aa32.79■■■□□ 2.84
CSNK1E-204ENST00000403904 NME1P15531 152 aaKnown RBP32.78■■■□□ 2.84
CSNK1E-204ENST00000403904 H2AFXP16104 143 aaPredicted RBP32.78■■■□□ 2.84
CSNK1E-204ENST00000403904 BLKP51451 505 aa32.78■■■□□ 2.84
CSNK1E-204ENST00000403904 CSE1LP55060 971 aaKnown RBP32.78■■■□□ 2.84
CSNK1E-204ENST00000403904 RBM20Q5T481 1227 aaKnown RBP32.78■■■□□ 2.84
CSNK1E-204ENST00000403904 C11orf96Q7Z7L8 435 aa32.78■■■□□ 2.84
CSNK1E-204ENST00000403904 KRT222Q8N1A0 295 aa32.78■■■□□ 2.84
CSNK1E-204ENST00000403904 OR2M4Q96R27 311 aa32.78■■■□□ 2.84
CSNK1E-204ENST00000403904 RBBP8Q99708 897 aa32.78■■■□□ 2.84
CSNK1E-204ENST00000403904 CCDC77Q9BR77 488 aa32.78■■■□□ 2.84
CSNK1E-204ENST00000403904 SLC13A1Q9BZW2 595 aa32.78■■■□□ 2.84
CSNK1E-204ENST00000403904 TMEM168Q9H0V1 697 aa32.78■■■□□ 2.84
CSNK1E-204ENST00000403904 RHOJQ9H4E5 214 aa32.78■■■□□ 2.84
CSNK1E-204ENST00000403904 ARGLU1Q9NWB6 273 aaPredicted RBP32.78■■■□□ 2.84
CSNK1E-204ENST00000403904 NCDNQ9UBB6 729 aa32.78■■■□□ 2.84
CSNK1E-204ENST00000403904 ARHGAP33O14559 1287 aa32.77■■■□□ 2.84
CSNK1E-204ENST00000403904 KMOO15229 486 aa32.77■■■□□ 2.84
CSNK1E-204ENST00000403904 ITGB6P18564 788 aa32.77■■■□□ 2.84
CSNK1E-204ENST00000403904 HLA-BQ31612 363 aa32.77■■■□□ 2.84
CSNK1E-204ENST00000403904 GRTP1Q5TC63 336 aa32.77■■■□□ 2.84
CSNK1E-204ENST00000403904 GPATCH11Q8N954 259 aa32.77■■■□□ 2.84
CSNK1E-204ENST00000403904 OR2W6PQ8NHA6 318 aa32.77■■■□□ 2.84
CSNK1E-204ENST00000403904 LKAAEAR1Q8TD35 194 aa32.77■■■□□ 2.84
CSNK1E-204ENST00000403904 ELF4Q99607 663 aaPredicted RBP32.77■■■□□ 2.84
CSNK1E-204ENST00000403904 SLC23A2Q9UGH3 650 aa32.77■■■□□ 2.84
CSNK1E-204ENST00000403904 APOBEC3BQ9UH17 382 aaKnown RBP32.77■■■□□ 2.84
CSNK1E-204ENST00000403904 RAPGEFL1Q9UHV5 662 aa32.77■■■□□ 2.84
CSNK1E-204ENST00000403904 QSOX1O00391 747 aa32.76■■■□□ 2.84
CSNK1E-204ENST00000403904 NIPSNAP2O75323 286 aa32.76■■■□□ 2.84
CSNK1E-204ENST00000403904 POP7O75817 140 aaKnown RBP32.76■■■□□ 2.84
CSNK1E-204ENST00000403904 TRIM16O95361 564 aa32.76■■■□□ 2.84
CSNK1E-204ENST00000403904 GCAP28676 217 aa32.76■■■□□ 2.84
CSNK1E-204ENST00000403904 PBLDP30039 288 aaPredicted RBP32.76■■■□□ 2.84
CSNK1E-204ENST00000403904 MSH2P43246 934 aa32.76■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms