RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 TSPY1Q01534 308 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 KCNAB2Q13303 367 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 GPR162Q16538 588 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 CCDC92Q53HC0 331 aaPredicted RBP9.08□□□□□ -0.96
HPS4-203ENST00000402105 PM20D1Q6GTS8 502 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 OVOS1Q6IE37 1185 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 TMEM53Q6P2H8 277 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 DET1Q7L5Y6 550 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 MICU2Q8IYU8 434 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 PACRGLQ8N7B6 248 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 LINGO1Q96FE5 620 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 UHRF1Q96T88 793 aaPredicted RBP9.08□□□□□ -0.96
HPS4-203ENST00000402105 NEURL2Q9BR09 285 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 CD320Q9NPF0 282 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 SDR39U1Q9NRG7 319 aaPredicted RBP9.08□□□□□ -0.96
HPS4-203ENST00000402105 MRGBPQ9NV56 204 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 MTRRQ9UBK8 725 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 ST3GAL5Q9UNP4 418 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 PCDHGA11Q9Y5H2 935 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 PCDHA9Q9Y5H5 950 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 CLDN25C9JDP6 229 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 PDHXO00330 501 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 LRATO95237 230 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 ANXA6P08133 673 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 HSD17B1P14061 328 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 EFNA1P20827 205 aaPredicted RBP9.08□□□□□ -0.96
HPS4-203ENST00000402105 HRH2P25021 359 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 AXLP30530 894 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 AIF1P55008 147 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 IHHQ14623 411 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 AP5B1Q2VPB7 878 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 GTDC1Q4AE62 458 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 C10orf120Q5SQS8 335 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 IQSEC1Q6DN90 963 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 SPARTQ8N0X7 666 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 RTL3Q8N8U3 475 aaKnown RBP9.08□□□□□ -0.96
HPS4-203ENST00000402105 LPCAT1Q8NF37 534 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 OR2T12Q8NG77 320 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 EEF1AKMT1Q8WVE0 214 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 NODALQ96S42 347 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 C6orf62Q9GZU0 229 aaPredicted RBP9.08□□□□□ -0.96
HPS4-203ENST00000402105 COMMD8Q9NX08 183 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 SEPT3Q9UH03 358 aa9.08□□□□□ -0.96
HPS4-203ENST00000402105 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.08□□□□□ -0.96
HPS4-203ENST00000402105 A0A1W2PQ67 120 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 UPK3BL1B0FP48 263 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 FAM155AB1AL88 458 aaPredicted RBP9.07□□□□□ -0.96
HPS4-203ENST00000402105 UPK3BL2E5RIL1 263 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 FZD9O00144 591 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 BNIP3LO60238 219 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 TLR5O60602 858 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 RAMP2O60895 175 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 ITGB1P05556 798 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 FAM163BP0C2L3 166 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 MTHFD2P13995 350 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 HTR1BP28222 390 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 RCVRNP35243 200 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 TBX4P57082 545 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 TRIP4Q15650 581 aaPredicted RBP9.07□□□□□ -0.96
HPS4-203ENST00000402105 GPRIN3Q6ZVF9 776 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 GPSM1Q86YR5 675 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 PLD3Q8IV08 490 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 OR10T2Q8NGX3 314 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 ZNF420Q8TAQ5 688 aaPredicted RBP9.07□□□□□ -0.96
HPS4-203ENST00000402105 NDNFQ8TB73 568 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 RORBQ92753 470 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 VTA1Q9NP79 307 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 ATAD3AQ9NVI7 634 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 TRMT6Q9UJA5 497 aaKnown RBP9.07□□□□□ -0.96
HPS4-203ENST00000402105 CDH9Q9ULB4 789 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 ERGIC3Q9Y282 383 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 ATP11BQ9Y2G3 1177 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 PCDHGC4Q9Y5F7 938 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 GPR45Q9Y5Y3 372 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 ASPDHA6ND91 283 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 ARL5CA6NH57 179 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 MYCLP1P12525 358 aaPredicted RBP9.07□□□□□ -0.96
HPS4-203ENST00000402105 RPL34P49207 117 aaKnown RBP9.07□□□□□ -0.96
HPS4-203ENST00000402105 CD47Q08722 323 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 MADCAM1Q13477 382 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 AQP6Q13520 282 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 SYT16Q17RD7 645 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 FAM174BQ3ZCQ3 159 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 DUSP28Q4G0W2 176 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 C6orf136Q5SQH8 315 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 SULT1C3Q6IMI6 304 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 GLT6D1Q7Z4J2 308 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 Q8N9G6 341 aaPredicted RBP9.07□□□□□ -0.96
HPS4-203ENST00000402105 OR13F1Q8NGS4 319 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 GIPC2Q8TF65 315 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 RAB2BQ8WUD1 216 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 SLC22A17Q8WUG5 538 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 RHNO1Q9BSD3 238 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 LRRC3Q9BY71 257 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 TRIM54Q9BYV2 358 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 ACTR8Q9H981 624 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 ABCC13Q9NSE7 274 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 FAM105AQ9NUU6 356 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 RIC8BQ9NVN3 520 aa9.07□□□□□ -0.96
HPS4-203ENST00000402105 SLC12A8A0AV02 714 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms