RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 DHFR2Q86XF0 187 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 OR4K17Q8NGC6 315 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 TCF12Q99081 682 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 SMOC2Q9H3U7 446 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 PRKAB1Q9Y478 270 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.87□□□□□ -1.15
USP47-203ENST00000399455 DGKBQ9Y6T7 804 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 DUSP10Q9Y6W6 482 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 DLG5Q8TDM6 1919 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 SAC3D1A6NKF1 404 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 STX11O75558 287 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 TRAPPC6AO75865 159 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 RBPJQ06330 500 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 HNRNPDQ14103 355 aaKnown RBP7.87□□□□□ -1.15
USP47-203ENST00000399455 HEPACAMQ14CZ8 416 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 TBCELQ5QJ74 424 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 ERN2Q76MJ5 926 aaKnown RBP7.87□□□□□ -1.15
USP47-203ENST00000399455 RAB43Q86YS6 212 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 SMYD1Q8NB12 490 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 RHBDD1Q8TEB9 315 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 WDR92Q96MX6 357 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 DUSP23Q9BVJ7 150 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 RIOK2Q9BVS4 552 aaKnown RBP7.87□□□□□ -1.15
USP47-203ENST00000399455 ZNF576Q9H609 170 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 ERVK-5Q9HDB9 667 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 NKIRAS2Q9NYR9 191 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 C5P01031 1676 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 MRASO14807 208 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 PFDN1O60925 122 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 CALCAP01258 141 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 TSPAN19P0C672 248 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 IDO1P14902 403 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 IL17AQ16552 155 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 LIPMQ5VYY2 423 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 SH3RF1Q7Z6J0 888 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 SLC30A8Q8IWU4 369 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 PRSS58Q8IYP2 241 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 PSMG2Q969U7 264 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 CPXM1Q96SM3 734 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 LRMDAQ9H2I8 198 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 ITM2CQ9NQX7 267 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 KLHL1Q9NR64 748 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 COL16A1Q07092 1604 aaPredicted RBP7.87□□□□□ -1.15
USP47-203ENST00000399455 UGT2B17O75795 530 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 ESR1P03372 595 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 SELENOVP59797 346 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 CDC42P60953 191 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 EIF4HQ15056 248 aaKnown RBP7.87□□□□□ -1.15
USP47-203ENST00000399455 SOWAHAQ2M3V2 549 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 PTPN20Q4JDL3 420 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 INO80DQ53TQ3 878 aaPredicted RBP7.87□□□□□ -1.15
USP47-203ENST00000399455 PTCRAQ6ISU1 281 aaPredicted RBP7.87□□□□□ -1.15
USP47-203ENST00000399455 ARMC8Q8IUR7 673 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 RASSF5Q8WWW0 418 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 RNFT2Q96EX2 444 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 PANX1Q96RD7 426 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 REXO4Q9GZR2 422 aaKnown RBP7.87□□□□□ -1.15
USP47-203ENST00000399455 ADAM7Q9H2U9 754 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 SMURF2Q9HAU4 748 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 MARK1Q9P0L2 795 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 EFR3BQ9Y2G0 817 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 TCAF1Q9Y4C2 921 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 CAPN6Q9Y6Q1 641 aa7.87□□□□□ -1.15
USP47-203ENST00000399455 ACOT7O00154 380 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 MMP20O60882 483 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 DLDP09622 509 aaKnown RBP7.86□□□□□ -1.15
USP47-203ENST00000399455 C5AR1P21730 350 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 TMED1Q13445 227 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 CPSF6Q16630 551 aaKnown RBP eCLIP7.86□□□□□ -1.15
USP47-203ENST00000399455 SLC9A6Q92581 669 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 PMEPA1Q969W9 287 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 SEC16BQ96JE7 1060 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 MYLK2Q9H1R3 596 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 NINJ2Q9NZG7 142 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 FBXO5Q9UKT4 447 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 SNX7Q9UNH6 387 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 PCDHGA2Q9Y5H1 932 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 FAM25AB3EWG3 89 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 FAM25CB3EWG5 89 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 FAM25GB3EWG6 89 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 FCHO1O14526 889 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 SCAMP1O15126 338 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 AXIN1O15169 862 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 YKT6O15498 198 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 PAPSS1O43252 624 aaPredicted RBP7.86□□□□□ -1.15
USP47-203ENST00000399455 STK16O75716 305 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 AGR2O95994 175 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 ZNF8P17098 575 aaPredicted RBP7.86□□□□□ -1.15
USP47-203ENST00000399455 CASP9P55211 416 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 COX10Q12887 443 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 OVGP1Q12889 678 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 SMU1Q2TAY7 513 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 MS4A13Q5J8X5 152 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 PITRM1Q5JRX3 1037 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 KLRF1Q9NZS2 232 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 ACSL5Q9ULC5 683 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 KLHL33A6NCF5 533 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 TAF4O00268 1085 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 TGFB1I1O43294 461 aa7.86□□□□□ -1.15
USP47-203ENST00000399455 LRIG2O94898 1065 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms