RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 OR56A5P0C7T3 313 aa20.91■□□□□ 0.94
CPNE1-204ENST00000397443 CSRP3P50461 194 aa20.91■□□□□ 0.94
CPNE1-204ENST00000397443 DLG1Q12959 904 aa20.91■□□□□ 0.94
CPNE1-204ENST00000397443 TAX1BP1Q86VP1 789 aa20.91■□□□□ 0.94
CPNE1-204ENST00000397443 CENPLQ8N0S6 344 aaPredicted RBP20.91■□□□□ 0.94
CPNE1-204ENST00000397443 ARFGAP2Q8N6H7 521 aa20.91■□□□□ 0.94
CPNE1-204ENST00000397443 NXNL1Q96CM4 212 aa20.91■□□□□ 0.94
CPNE1-204ENST00000397443 TSNARE1Q96NA8 513 aa20.91■□□□□ 0.94
CPNE1-204ENST00000397443 ATXN10Q9UBB4 475 aa20.91■□□□□ 0.94
CPNE1-204ENST00000397443 RUVBL2Q9Y230 463 aaKnown RBP20.91■□□□□ 0.94
CPNE1-204ENST00000397443 COMMD10Q9Y6G5 202 aa20.91■□□□□ 0.94
CPNE1-204ENST00000397443 USP34Q70CQ2 3546 aa20.91■□□□□ 0.94
CPNE1-204ENST00000397443 SDK1Q7Z5N4 2213 aa20.91■□□□□ 0.94
CPNE1-204ENST00000397443 NDUFS2O75306 463 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 CRHR1P34998 444 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 ILF2Q12905 390 aaKnown RBP20.9■□□□□ 0.94
CPNE1-204ENST00000397443 N4BP2L1Q5TBK1 243 aaPredicted RBP20.9■□□□□ 0.94
CPNE1-204ENST00000397443 KIAA0895LQ68EN5 471 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 TMEM220Q6QAJ8 160 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 ADGRG6Q86SQ4 1221 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 CNPY4Q8N129 248 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 CCDC63Q8NA47 563 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 CD200R1Q8TD46 325 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 SSU72Q9NP77 194 aaKnown RBP20.9■□□□□ 0.94
CPNE1-204ENST00000397443 DCDC2Q9UHG0 476 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 PRKAB1Q9Y478 270 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 A0A087X1B8 175 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 POM121BA6NF01 834 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 H3BMM5 538 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 AXIN1O15169 862 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 GLRA3O75311 464 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 IGHV4-34P06331 123 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 ZNF37AP17032 561 aaPredicted RBP20.9■□□□□ 0.94
CPNE1-204ENST00000397443 PBLDP30039 288 aaPredicted RBP20.9■□□□□ 0.94
CPNE1-204ENST00000397443 CLCN7P51798 805 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 TRAPPC5Q8IUR0 188 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 CPNE9Q8IYJ1 553 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 ARMC2Q8NEN0 867 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 BIRC7Q96CA5 298 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 SCYL1Q96KG9 808 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 C1QTNF1Q9BXJ1 281 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 TRIM39Q9HCM9 518 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 TMEM216Q9P0N5 145 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 PLLPQ9Y342 182 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 ABCA7Q8IZY2 2146 aa20.9■□□□□ 0.94
CPNE1-204ENST00000397443 SGTAO43765 313 aa20.89■□□□□ 0.93
CPNE1-204ENST00000397443 ZNF8P17098 575 aaPredicted RBP20.89■□□□□ 0.93
CPNE1-204ENST00000397443 GUCY1A3Q02108 690 aa20.89■□□□□ 0.93
CPNE1-204ENST00000397443 LVRNQ6Q4G3 990 aa20.89■□□□□ 0.93
CPNE1-204ENST00000397443 CRTC3Q6UUV7 619 aa20.89■□□□□ 0.93
CPNE1-204ENST00000397443 OTOAQ7RTW8 1153 aa20.89■□□□□ 0.93
CPNE1-204ENST00000397443 CLEC14AQ86T13 490 aa20.89■□□□□ 0.93
CPNE1-204ENST00000397443 HEXDCQ8WVB3 486 aa20.89■□□□□ 0.93
CPNE1-204ENST00000397443 ZCCHC2Q9C0B9 1178 aaKnown RBP20.89■□□□□ 0.93
CPNE1-204ENST00000397443 CNOT10Q9H9A5 744 aaKnown RBP20.89■□□□□ 0.93
CPNE1-204ENST00000397443 INTS9Q9NV88 658 aaKnown RBP20.89■□□□□ 0.93
CPNE1-204ENST00000397443 GRID1Q9ULK0 1009 aa20.89■□□□□ 0.93
CPNE1-204ENST00000397443 ANKRD6Q9Y2G4 727 aa20.89■□□□□ 0.93
CPNE1-204ENST00000397443 HNRNPA2B1P22626 353 aaKnown RBP20.88■□□□□ 0.93
CPNE1-204ENST00000397443 GTF2H3Q13889 308 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 BOP1Q14137 746 aaKnown RBP20.88■□□□□ 0.93
CPNE1-204ENST00000397443 PLA2G4EQ3MJ16 856 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 UGT3A1Q6NUS8 523 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 COX14Q96I36 57 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 PANX3Q96QZ0 392 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 TEX101Q9BY14 249 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 PHPT1Q9NRX4 125 aaPredicted RBP20.88■□□□□ 0.93
CPNE1-204ENST00000397443 IGSF5Q9NSI5 407 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 EMCNQ9ULC0 261 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 WDR91A4D1P6 747 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 FPGTO14772 594 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 LATO43561 262 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 ZWINTO95229 277 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 CCR7P32248 378 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 TRIM23P36406 574 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 RPL6Q02878 288 aaKnown RBP20.88■□□□□ 0.93
CPNE1-204ENST00000397443 HHATQ5VTY9 493 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 EEF1AKMT1Q8WVE0 214 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 IER2Q9BTL4 223 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 APOOQ9BUR5 198 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 SPATS2LQ9NUQ6 558 aaKnown RBP20.88■□□□□ 0.93
CPNE1-204ENST00000397443 MKS1Q9NXB0 559 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 CPSF2Q9P2I0 782 aaKnown RBP20.88■□□□□ 0.93
CPNE1-204ENST00000397443 MOSPD1Q9UJG1 213 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 DHRS7Q9Y394 339 aa20.88■□□□□ 0.93
CPNE1-204ENST00000397443 TMEM202A6NGA9 273 aa20.87■□□□□ 0.93
CPNE1-204ENST00000397443 TM9SF1O15321 606 aa20.87■□□□□ 0.93
CPNE1-204ENST00000397443 KLHL2O95198 593 aa20.87■□□□□ 0.93
CPNE1-204ENST00000397443 LTA4HP09960 611 aaKnown RBP20.87■□□□□ 0.93
CPNE1-204ENST00000397443 AKT2P31751 481 aa20.87■□□□□ 0.93
CPNE1-204ENST00000397443 SKIV2L2P42285 1042 aaKnown RBP20.87■□□□□ 0.93
CPNE1-204ENST00000397443 MAGEA9P43362 315 aa20.87■□□□□ 0.93
CPNE1-204ENST00000397443 WDR4P57081 412 aaKnown RBP20.87■□□□□ 0.93
CPNE1-204ENST00000397443 FAM83EQ2M2I3 478 aa20.87■□□□□ 0.93
CPNE1-204ENST00000397443 ZBTB2Q8N680 514 aa20.87■□□□□ 0.93
CPNE1-204ENST00000397443 DENND1AQ8TEH3 1009 aa20.87■□□□□ 0.93
CPNE1-204ENST00000397443 DYDC1Q8WWB3 177 aa20.87■□□□□ 0.93
CPNE1-204ENST00000397443 ASB12Q8WXK4 309 aa20.87■□□□□ 0.93
CPNE1-204ENST00000397443 ELMO1Q92556 727 aa20.87■□□□□ 0.93
CPNE1-204ENST00000397443 FOXJ1Q92949 421 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms