RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 SHC2P98077 582 aa24.97■■□□□ 1.59
TSPAN4-207ENST00000397411 DHX34Q14147 1143 aaKnown RBP24.97■■□□□ 1.59
TSPAN4-207ENST00000397411 IZUMO3Q5VZ72 239 aa24.97■■□□□ 1.59
TSPAN4-207ENST00000397411 ZNF534Q76KX8 674 aa24.97■■□□□ 1.59
TSPAN4-207ENST00000397411 TRBV5-4A0A0C4DH59 114 aa24.96■■□□□ 1.59
TSPAN4-207ENST00000397411 MAGEB16A2A368 324 aa24.96■■□□□ 1.59
TSPAN4-207ENST00000397411 DNALI1O14645 258 aaPredicted RBP24.96■■□□□ 1.59
TSPAN4-207ENST00000397411 TTI1O43156 1089 aa24.96■■□□□ 1.59
TSPAN4-207ENST00000397411 NUDT21O43809 227 aaKnown RBP24.96■■□□□ 1.59
TSPAN4-207ENST00000397411 URI1O94763 535 aaPredicted RBP24.96■■□□□ 1.59
TSPAN4-207ENST00000397411 NMBRP28336 390 aa24.96■■□□□ 1.59
TSPAN4-207ENST00000397411 CLDN6P56747 220 aa24.96■■□□□ 1.59
TSPAN4-207ENST00000397411 SEPT7Q16181 437 aaKnown RBP24.96■■□□□ 1.59
TSPAN4-207ENST00000397411 IYDQ6PHW0 289 aa24.96■■□□□ 1.59
TSPAN4-207ENST00000397411 MICALCLQ6ZW33 695 aa24.96■■□□□ 1.59
TSPAN4-207ENST00000397411 CAND1Q86VP6 1230 aaKnown RBP24.96■■□□□ 1.59
TSPAN4-207ENST00000397411 JAMLQ86YT9 394 aa24.96■■□□□ 1.59
TSPAN4-207ENST00000397411 OTUD6BQ8N6M0 293 aa24.96■■□□□ 1.59
TSPAN4-207ENST00000397411 NAT8LQ8N9F0 302 aa24.96■■□□□ 1.59
TSPAN4-207ENST00000397411 WDR48Q8TAF3 677 aa24.96■■□□□ 1.59
TSPAN4-207ENST00000397411 MRM3Q9HC36 420 aaKnown RBP24.96■■□□□ 1.59
TSPAN4-207ENST00000397411 CLCA2Q9UQC9 943 aa24.96■■□□□ 1.59
TSPAN4-207ENST00000397411 EML2O95834 649 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 F3P13726 295 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 PNLIPP16233 465 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 ALDH4A1P30038 563 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 FOXN2P32314 431 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 ACVR1Q04771 509 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 DBN1Q16643 649 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 RNASEH2BQ5TBB1 312 aaKnown RBP24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 CES3Q6UWW8 571 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 CERS6Q6ZMG9 384 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 SLC9B2Q86UD5 537 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 CCNJLQ8IV13 435 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 TRIM48Q8IWZ4 208 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 PIANPQ8IYJ0 282 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 BEND7Q8N7W2 519 aaPredicted RBP24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 SPATA4Q8NEY3 305 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 NAT14Q8WUY8 206 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 SERPINB12Q96P63 405 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 KIFC1Q9BW19 673 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 CATSPERZQ9NTU4 200 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 FAM8A1Q9UBU6 413 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 SOX13Q9UN79 622 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 WASF3Q9UPY6 502 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 MSRB2Q9Y3D2 182 aa24.95■■□□□ 1.58
TSPAN4-207ENST00000397411 KIR2DS5A0A0G2JLQ3 304 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 A0A0G2JNG1 304 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 KIR2DS3K7RE56 304 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 TUBB4AP04350 444 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 RPLP0P05388 317 aaKnown RBP24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 PAMP19021 973 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 RPL10P27635 214 aaKnown RBP24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 HALP42357 657 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 CCL7P80098 99 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 B4GALNT1Q00973 533 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 CKAP4Q07065 602 aaKnown RBP24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 SPIDRQ14159 915 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 ITIH4Q14624 930 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 KIR2DS5Q14953 304 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 AARS2Q5JTZ9 985 aaKnown RBP24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 ARMC3Q5W041 872 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 MAATS1Q7Z4T9 603 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 C11orf96Q7Z7L8 435 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 C17orf82Q86X59 251 aaPredicted RBP24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 MARCH9Q86YJ5 346 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 SLC37A2Q8TED4 501 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 DEPDC7Q96QD5 511 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 GFM1Q96RP9 751 aaKnown RBP24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 TRIM51Q9BSJ1 452 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 TRIM31Q9BZY9 425 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 VPS37BQ9H9H4 285 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 MAD1L1Q9Y6D9 718 aa24.94■■□□□ 1.58
TSPAN4-207ENST00000397411 KLHL33A6NCF5 533 aa24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 MGAT4DA6NG13 374 aa24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 F8W8V4 182 aa24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 KIF2AO00139 706 aaPredicted RBP24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 NSG1P42857 185 aa24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 DRG2P55039 364 aaKnown RBP24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 C2orf54Q08AI8 447 aa24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 TARDBPQ13148 414 aaKnown RBP eCLIP24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 BCL7AQ4VC05 210 aa24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 CCNI2Q6ZMN8 369 aaPredicted RBP24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 RBM44Q6ZP01 1051 aaKnown RBP24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 MPP5Q8N3R9 675 aa24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 SFRP1Q8N474 314 aa24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 AVL9Q8NBF6 648 aa24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 SH3KBP1Q96B97 665 aa24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 SLC38A3Q99624 504 aa24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 LRRN3Q9H3W5 708 aa24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 TREX1Q9NSU2 369 aa24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 RABGEF1Q9UJ41 708 aa24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 KNTC1P50748 2209 aa24.93■■□□□ 1.58
TSPAN4-207ENST00000397411 EFCAB8A8MWE9 144 aa24.92■■□□□ 1.58
TSPAN4-207ENST00000397411 CD3EAPO15446 510 aaKnown RBP24.92■■□□□ 1.58
TSPAN4-207ENST00000397411 VAPBO95292 243 aa24.92■■□□□ 1.58
TSPAN4-207ENST00000397411 HHEXQ03014 270 aa24.92■■□□□ 1.58
TSPAN4-207ENST00000397411 ZNF449Q6P9G9 518 aa24.92■■□□□ 1.58
TSPAN4-207ENST00000397411 SDCCAG8Q86SQ7 713 aaPredicted RBP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms