RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 VCLP18206 1134 aa20.86■□□□□ 0.93
TSPAN4-206ENST00000397408 PBLDP30039 288 aaPredicted RBP20.86■□□□□ 0.93
TSPAN4-206ENST00000397408 CLCNKAP51800 687 aa20.86■□□□□ 0.93
TSPAN4-206ENST00000397408 MORF4L2Q15014 288 aa20.86■□□□□ 0.93
TSPAN4-206ENST00000397408 WHAMMP3Q1A5X7 153 aa20.86■□□□□ 0.93
TSPAN4-206ENST00000397408 BCL7AQ4VC05 210 aa20.86■□□□□ 0.93
TSPAN4-206ENST00000397408 ARMC3Q5W041 872 aa20.86■□□□□ 0.93
TSPAN4-206ENST00000397408 MAATS1Q7Z4T9 603 aa20.86■□□□□ 0.93
TSPAN4-206ENST00000397408 AGGF1Q8N302 714 aaeCLIP20.86■□□□□ 0.931e-7■■■■□ 23.7
TSPAN4-206ENST00000397408 CCDC74AQ96AQ1 378 aa20.86■□□□□ 0.93
TSPAN4-206ENST00000397408 SNF8Q96H20 258 aa20.86■□□□□ 0.93
TSPAN4-206ENST00000397408 A6NCN8 305 aa20.85■□□□□ 0.93
TSPAN4-206ENST00000397408 SGTAO43765 313 aa20.85■□□□□ 0.93
TSPAN4-206ENST00000397408 SEC31AO94979 1220 aaKnown RBP20.85■□□□□ 0.93
TSPAN4-206ENST00000397408 CDK4P11802 303 aa20.85■□□□□ 0.93
TSPAN4-206ENST00000397408 ATP1B2P14415 290 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-206ENST00000397408 ITGA8P53708 1063 aa20.85■□□□□ 0.93
TSPAN4-206ENST00000397408 ITIH4Q14624 930 aa20.85■□□□□ 0.93
TSPAN4-206ENST00000397408 SMAD1Q15797 465 aaKnown RBP20.85■□□□□ 0.93
TSPAN4-206ENST00000397408 FASTKD1Q53R41 847 aaKnown RBP20.85■□□□□ 0.93
TSPAN4-206ENST00000397408 AMZ2Q86W34 360 aa20.85■□□□□ 0.93
TSPAN4-206ENST00000397408 C17orf82Q86X59 251 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-206ENST00000397408 OR6C4Q8NGE1 309 aa20.85■□□□□ 0.93
TSPAN4-206ENST00000397408 ZNF669Q96BR6 464 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-206ENST00000397408 SGSM3Q96HU1 749 aa20.85■□□□□ 0.93
TSPAN4-206ENST00000397408 PRDM8Q9NQV8 689 aa20.85■□□□□ 0.93
TSPAN4-206ENST00000397408 CATSPERZQ9NTU4 200 aa20.85■□□□□ 0.93
TSPAN4-206ENST00000397408 SNX24Q9Y343 169 aa20.85■□□□□ 0.93
TSPAN4-206ENST00000397408 MAD1L1Q9Y6D9 718 aa20.85■□□□□ 0.93
TSPAN4-206ENST00000397408 RNF215Q9Y6U7 377 aa20.85■□□□□ 0.93
TSPAN4-206ENST00000397408 TRBV23OR9-2A0A075B6M9 112 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 PRR19A6NJB7 356 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 PDZK1P1A8MUH7 402 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 GLB1P16278 677 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 ARNTP27540 789 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 PRLHRP49683 370 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 CLDN6P56747 220 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 E2F1Q01094 437 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 BIRC2Q13490 618 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 SEMA3AQ14563 771 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 SEPT7Q16181 437 aaKnown RBP20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 LYPLAL1Q5VWZ2 237 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 KIAA0930Q6ICG6 404 aaPredicted RBP20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 HIBCHQ6NVY1 386 aaPredicted RBP20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 CERS6Q6ZMG9 384 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 ARL14Q8N4G2 192 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 KIF18AQ8NI77 898 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 MAPK15Q8TD08 544 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 SLC37A2Q8TED4 501 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 TTC1Q99614 292 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 CCDC3Q9BQI4 270 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 MARCH4Q9P2E8 410 aaPredicted RBP20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 RABGEF1Q9UJ41 708 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 ANAPC5Q9UJX4 755 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 MRFAP1Q9Y605 127 aa20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 DNMT3AQ9Y6K1 912 aaPredicted RBP20.84■□□□□ 0.93
TSPAN4-206ENST00000397408 FAM237BA0A1B0GVD1 139 aa20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 SMAPO00193 183 aa20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 NUDT21O43809 227 aaKnown RBP20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 VAPBO95292 243 aa20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 F3P13726 295 aa20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 SLC2A4P14672 509 aa20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 PAMP19021 973 aa20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 SPINK2P20155 84 aa20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 RPL21P46778 160 aaKnown RBP20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 DHX9Q08211 1270 aaKnown RBP20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 DMPKQ09013 629 aa20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 DNAJC21Q5F1R6 531 aaKnown RBP20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 AARS2Q5JTZ9 985 aaKnown RBP20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 PACS1Q6VY07 963 aa20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 SFRP1Q8N474 314 aa20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 CLDN19Q8N6F1 224 aa20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 OTUD6BQ8N6M0 293 aa20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 STAMBPL1Q96FJ0 436 aa20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 SIGLEC10Q96LC7 697 aa20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 LRIT1Q9P2V4 623 aa20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 FAM8A1Q9UBU6 413 aa20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 WASF3Q9UPY6 502 aa20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 RPS6KL1Q9Y6S9 549 aa20.83■□□□□ 0.93
TSPAN4-206ENST00000397408 MAGEB16A2A368 324 aa20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 CD3EAPO15446 510 aaKnown RBP20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 OPA1O60313 960 aa20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 KCNJ13O60928 360 aa20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 BANF1O75531 89 aa20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 IDSP22304 550 aa20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 RPL10P27635 214 aaKnown RBP20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 NSG1P42857 185 aa20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 DRG2P55039 364 aaKnown RBP20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 INSM1Q01101 510 aaPredicted RBP20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 NFE2L1Q14494 772 aa20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 BBS9Q3SYG4 887 aa20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 ANKRD20A4Q4UJ75 823 aa20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 HES3Q5TGS1 186 aa20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 IYDQ6PHW0 289 aa20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 FAM83HQ6ZRV2 1179 aaPredicted RBP20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 LDB1Q86U70 411 aaPredicted RBP20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 ERP44Q9BS26 406 aa20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 ABCG4Q9H172 646 aa20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 DPH5Q9H2P9 285 aa20.82■□□□□ 0.92
TSPAN4-206ENST00000397408 SYNDIG1Q9H7V2 258 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms