RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 RBM12BQ8IXT5 1001 aaKnown RBP22.69■■□□□ 1.22
U2AF1-202ENST00000380276 SIDT2Q8NBJ9 832 aaKnown RBP22.69■■□□□ 1.22
U2AF1-202ENST00000380276 SPATA22Q8NHS9 363 aa22.69■■□□□ 1.22
U2AF1-202ENST00000380276 CT55Q8WUE5 264 aa22.69■■□□□ 1.22
U2AF1-202ENST00000380276 SLC25A51Q9H1U9 297 aa22.69■■□□□ 1.22
U2AF1-202ENST00000380276 PDE7BQ9NP56 450 aa22.69■■□□□ 1.22
U2AF1-202ENST00000380276 SLC40A1Q9NP59 571 aa22.69■■□□□ 1.22
U2AF1-202ENST00000380276 NFKBIL1Q9UBC1 381 aaPredicted RBP22.69■■□□□ 1.22
U2AF1-202ENST00000380276 LCMT1Q9UIC8 334 aa22.69■■□□□ 1.22
U2AF1-202ENST00000380276 PADI1Q9ULC6 663 aa22.69■■□□□ 1.22
U2AF1-202ENST00000380276 PMPCBO75439 489 aa22.68■■□□□ 1.22
U2AF1-202ENST00000380276 CREG1O75629 220 aa22.68■■□□□ 1.22
U2AF1-202ENST00000380276 MT-CYBP00156 380 aaPredicted RBP22.68■■□□□ 1.22
U2AF1-202ENST00000380276 MT-ND3P03897 115 aa22.68■■□□□ 1.22
U2AF1-202ENST00000380276 FGF5P12034 268 aa22.68■■□□□ 1.22
U2AF1-202ENST00000380276 PBX1P40424 430 aa22.68■■□□□ 1.22
U2AF1-202ENST00000380276 ARL4DP49703 201 aa22.68■■□□□ 1.22
U2AF1-202ENST00000380276 TUBB3Q13509 450 aa22.68■■□□□ 1.22
U2AF1-202ENST00000380276 PLCL1Q15111 1095 aa22.68■■□□□ 1.22
U2AF1-202ENST00000380276 PDK1Q15118 436 aa22.68■■□□□ 1.22
U2AF1-202ENST00000380276 TCTN3Q6NUS6 607 aa22.68■■□□□ 1.22
U2AF1-202ENST00000380276 TTC30BQ8N4P2 665 aa22.68■■□□□ 1.22
U2AF1-202ENST00000380276 MIB2Q96AX9 1013 aa22.68■■□□□ 1.22
U2AF1-202ENST00000380276 IQCDQ96DY2 449 aa22.68■■□□□ 1.22
U2AF1-202ENST00000380276 DEF6Q9H4E7 631 aa22.68■■□□□ 1.22
U2AF1-202ENST00000380276 UBP1Q9NZI7 540 aa22.68■■□□□ 1.22
U2AF1-202ENST00000380276 TLK1Q9UKI8 766 aa22.68■■□□□ 1.22
U2AF1-202ENST00000380276 RARRES3Q9UL19 164 aa22.68■■□□□ 1.22
U2AF1-202ENST00000380276 SPO11Q9Y5K1 396 aa22.68■■□□□ 1.22
U2AF1-202ENST00000380276 AURKAO14965 403 aa22.67■■□□□ 1.22
U2AF1-202ENST00000380276 NDST3O95803 873 aa22.67■■□□□ 1.22
U2AF1-202ENST00000380276 KRT1P04264 644 aa22.67■■□□□ 1.22
U2AF1-202ENST00000380276 NTRK1P04629 796 aa22.67■■□□□ 1.22
U2AF1-202ENST00000380276 PPP1CAP62136 330 aa22.67■■□□□ 1.22
U2AF1-202ENST00000380276 TMEM115Q12893 351 aaPredicted RBP22.67■■□□□ 1.22
U2AF1-202ENST00000380276 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.67■■□□□ 1.22
U2AF1-202ENST00000380276 ATP13A5Q4VNC0 1218 aa22.67■■□□□ 1.22
U2AF1-202ENST00000380276 KLHL6Q8WZ60 621 aa22.67■■□□□ 1.22
U2AF1-202ENST00000380276 LHX9Q9NQ69 397 aa22.67■■□□□ 1.22
U2AF1-202ENST00000380276 WDR37Q9Y2I8 494 aa22.67■■□□□ 1.22
U2AF1-202ENST00000380276 COL12A1Q99715 3063 aa22.66■■□□□ 1.22
U2AF1-202ENST00000380276 A0A0A6YYK5 440 aaPredicted RBP22.66■■□□□ 1.22
U2AF1-202ENST00000380276 BLACEA4D250 179 aa22.66■■□□□ 1.22
U2AF1-202ENST00000380276 GOLGA6L19H0YKK7 550 aa22.66■■□□□ 1.22
U2AF1-202ENST00000380276 TIAF1O95411 115 aa22.66■■□□□ 1.22
U2AF1-202ENST00000380276 GYPCP04921 128 aa22.66■■□□□ 1.22
U2AF1-202ENST00000380276 TNNT1P13805 278 aa22.66■■□□□ 1.22
U2AF1-202ENST00000380276 NELFEP18615 380 aaKnown RBP22.66■■□□□ 1.22
U2AF1-202ENST00000380276 TNNT3P45378 269 aaPredicted RBP22.66■■□□□ 1.22
U2AF1-202ENST00000380276 PMS2P54278 862 aa22.66■■□□□ 1.22
U2AF1-202ENST00000380276 KCNAB1Q14722 419 aa22.66■■□□□ 1.22
U2AF1-202ENST00000380276 AGAP9Q5VTM2 703 aa22.66■■□□□ 1.22
U2AF1-202ENST00000380276 VPS35Q96QK1 796 aa22.66■■□□□ 1.22
U2AF1-202ENST00000380276 SRPK1Q96SB4 655 aaKnown RBP22.66■■□□□ 1.22
U2AF1-202ENST00000380276 ACTL8Q9H568 366 aa22.66■■□□□ 1.22
U2AF1-202ENST00000380276 GLOD4Q9HC38 313 aa22.66■■□□□ 1.22
U2AF1-202ENST00000380276 PSMD13Q9UNM6 376 aa22.66■■□□□ 1.22
U2AF1-202ENST00000380276 DNAJB5O75953 348 aa22.65■■□□□ 1.22
U2AF1-202ENST00000380276 ZFXP17010 805 aaPredicted RBP22.65■■□□□ 1.22
U2AF1-202ENST00000380276 PBLDP30039 288 aaPredicted RBP22.65■■□□□ 1.22
U2AF1-202ENST00000380276 NOMO1Q15155 1222 aa22.65■■□□□ 1.22
U2AF1-202ENST00000380276 SLC9A4Q6AI14 798 aa22.65■■□□□ 1.22
U2AF1-202ENST00000380276 WASH2PQ6VEQ5 465 aa22.65■■□□□ 1.22
U2AF1-202ENST00000380276 GPR150Q8NGU9 434 aa22.65■■□□□ 1.22
U2AF1-202ENST00000380276 RNF25Q96BH1 459 aaPredicted RBP22.65■■□□□ 1.22
U2AF1-202ENST00000380276 WASH6PQ9NQA3 447 aa22.65■■□□□ 1.22
U2AF1-202ENST00000380276 TMPRSS11EQ9UL52 423 aa22.65■■□□□ 1.22
U2AF1-202ENST00000380276 NENFQ9UMX5 172 aa22.65■■□□□ 1.22
U2AF1-202ENST00000380276 IGHV5-51A0A0C4DH38 117 aa22.64■■□□□ 1.21
U2AF1-202ENST00000380276 F5H423 210 aaPredicted RBP22.64■■□□□ 1.21
U2AF1-202ENST00000380276 EBLN1P0CF75 366 aa22.64■■□□□ 1.21
U2AF1-202ENST00000380276 FOLR1P15328 257 aa22.64■■□□□ 1.21
U2AF1-202ENST00000380276 PPP2R5EQ16537 467 aa22.64■■□□□ 1.21
U2AF1-202ENST00000380276 PWWP2BQ6NUJ5 590 aa22.64■■□□□ 1.21
U2AF1-202ENST00000380276 KLHL35Q6PF15 583 aa22.64■■□□□ 1.21
U2AF1-202ENST00000380276 C11orf96Q7Z7L8 435 aa22.64■■□□□ 1.21
U2AF1-202ENST00000380276 AMZ2Q86W34 360 aa22.64■■□□□ 1.21
U2AF1-202ENST00000380276 SLC25A41Q8N5S1 370 aa22.64■■□□□ 1.21
U2AF1-202ENST00000380276 EFCAB3Q8N7B9 438 aa22.64■■□□□ 1.21
U2AF1-202ENST00000380276 BRSK1Q8TDC3 778 aa22.64■■□□□ 1.21
U2AF1-202ENST00000380276 UBXN4Q92575 508 aa22.64■■□□□ 1.21
U2AF1-202ENST00000380276 RUFY1Q96T51 708 aa22.64■■□□□ 1.21
U2AF1-202ENST00000380276 ZCCHC2Q9C0B9 1178 aaKnown RBP22.64■■□□□ 1.21
U2AF1-202ENST00000380276 LRRC4CQ9HCJ2 640 aa22.64■■□□□ 1.21
U2AF1-202ENST00000380276 IFNKQ9P0W0 207 aa22.64■■□□□ 1.21
U2AF1-202ENST00000380276 EPHA6Q9UF33 1036 aa22.64■■□□□ 1.21
U2AF1-202ENST00000380276 PCDHGA6Q9Y5G7 932 aa22.64■■□□□ 1.21
U2AF1-202ENST00000380276 UBA6A0AVT1 1052 aaPredicted RBP22.63■■□□□ 1.21
U2AF1-202ENST00000380276 GOLGA6L3A6NEY3 463 aa22.63■■□□□ 1.21
U2AF1-202ENST00000380276 TTLL8A6PVC2 850 aa22.63■■□□□ 1.21
U2AF1-202ENST00000380276 C21orf140B9A014 251 aa22.63■■□□□ 1.21
U2AF1-202ENST00000380276 VPS4BO75351 444 aa22.63■■□□□ 1.21
U2AF1-202ENST00000380276 FECHP22830 423 aa22.63■■□□□ 1.21
U2AF1-202ENST00000380276 RPS18P62269 152 aaKnown RBP22.63■■□□□ 1.21
U2AF1-202ENST00000380276 ACY1Q03154 408 aa22.63■■□□□ 1.21
U2AF1-202ENST00000380276 SLC18A3Q16572 532 aa22.63■■□□□ 1.21
U2AF1-202ENST00000380276 DNTTIP2Q5QJE6 756 aaKnown RBP22.63■■□□□ 1.21
U2AF1-202ENST00000380276 FAM199XQ6PEV8 388 aaPredicted RBP22.63■■□□□ 1.21
U2AF1-202ENST00000380276 FAM151BQ6UXP7 276 aa22.63■■□□□ 1.21
U2AF1-202ENST00000380276 MAP3K3Q99759 626 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms