RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 DEPDC1Q5TB30 811 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 MRNIPQ6NTE8 343 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 NPAS4Q8IUM7 802 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 EPHX4Q8IUS5 362 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 FAM126BQ8IXS8 530 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 CADM3Q8N126 398 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 MDGA1Q8NFP4 955 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 L3HYPDHQ96EM0 354 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 DUS3LQ96G46 650 aaKnown RBP16.98■□□□□ 0.31
TRIM27-201ENST00000377194 HHIPL1Q96JK4 782 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 ZNF599Q96NL3 588 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 CYP2S1Q96SQ9 504 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 DOK1Q99704 481 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 CCDC68Q9H2F9 335 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 FBRSL1Q9HCM7 1045 aaKnown RBP16.98■□□□□ 0.31
TRIM27-201ENST00000377194 CATSPERZQ9NTU4 200 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 DGKBQ9Y6T7 804 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 A0A0U1RQS6 177 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 RNF103-CHMP3A0A140T963 221 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 H7C4K7 107 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 UBDO15205 165 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 B4GAT1O43505 415 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 BMP2P12643 396 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 MYF6P23409 242 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 POLR2IP36954 125 aaKnown RBP16.98■□□□□ 0.31
TRIM27-201ENST00000377194 CDKN1CP49918 316 aaPredicted RBP16.98■□□□□ 0.31
TRIM27-201ENST00000377194 STC1P52823 247 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 SMARCB1Q12824 385 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 UGT3A2Q3SY77 523 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 DHFR2Q86XF0 187 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 TNIP2Q8NFZ5 429 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 ZNF420Q8TAQ5 688 aaPredicted RBP16.98■□□□□ 0.31
TRIM27-201ENST00000377194 PEX13Q92968 403 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 SCLYQ96I15 445 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 HMX1Q9NP08 348 aaPredicted RBP16.98■□□□□ 0.31
TRIM27-201ENST00000377194 COMMD8Q9NX08 183 aa16.98■□□□□ 0.31
TRIM27-201ENST00000377194 PTBP2Q9UKA9 531 aaKnown RBP16.98■□□□□ 0.31
TRIM27-201ENST00000377194 UBXN8O00124 270 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 CCNA2P20248 432 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 ATP6V1B2P21281 511 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 IDUAP35475 653 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 HERVK_113P63132 956 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 MERTKQ12866 999 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 ERMP1Q7Z2K6 904 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 BPIFB6Q8NFQ5 453 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 OR4K2Q8NGD2 314 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 OR9I1Q8NGQ6 314 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 PXYLP1Q8TE99 480 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 TRUB1Q8WWH5 349 aaKnown RBP16.97■□□□□ 0.31
TRIM27-201ENST00000377194 RMDN1Q96DB5 314 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 VN1R3Q9BXE9 311 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 ERVK-6Q9BXR3 956 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 RNF38Q9H0F5 515 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 POU2F3Q9UKI9 436 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 IKZF3Q9UKT9 509 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 SARDHQ9UL12 918 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 FAM50BQ9Y247 325 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 PTGDR2Q9Y5Y4 395 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 SCAMP3O14828 347 aaKnown RBP16.97■□□□□ 0.31
TRIM27-201ENST00000377194 SEC24AO95486 1093 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 BCL10O95999 233 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 CR2P20023 1033 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 HOXD10P28358 340 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 SUOXP51687 545 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 SLC7A2P52569 658 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 CDH4P55283 916 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 NME5P56597 212 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 ELAVL2Q12926 359 aaKnown RBP16.97■□□□□ 0.31
TRIM27-201ENST00000377194 PFKFB4Q16877 469 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 FBXO48Q5FWF7 155 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 SLC8B1Q6J4K2 584 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 PTGR2Q8N8N7 351 aaPredicted RBP16.97■□□□□ 0.31
TRIM27-201ENST00000377194 FAR2Q96K12 515 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 NSUN5Q96P11 429 aaKnown RBP16.97■□□□□ 0.31
TRIM27-201ENST00000377194 NDEL1Q9GZM8 345 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 RIC8BQ9NVN3 520 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 UBA2Q9UBT2 640 aaPredicted RBP16.97■□□□□ 0.31
TRIM27-201ENST00000377194 SEPT3Q9UH03 358 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 PCDHGC4Q9Y5F7 938 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 NOX1Q9Y5S8 564 aa16.97■□□□□ 0.31
TRIM27-201ENST00000377194 A0A1B0GTL3 188 aa16.96■□□□□ 0.31
TRIM27-201ENST00000377194 UBA6A0AVT1 1052 aaPredicted RBP16.96■□□□□ 0.31
TRIM27-201ENST00000377194 MRASO14807 208 aa16.96■□□□□ 0.31
TRIM27-201ENST00000377194 CLOCKO15516 846 aa16.96■□□□□ 0.31
TRIM27-201ENST00000377194 TSPAN3O60637 253 aa16.96■□□□□ 0.31
TRIM27-201ENST00000377194 SNAP91O60641 907 aa16.96■□□□□ 0.31
TRIM27-201ENST00000377194 HMGA1P17096 107 aaKnown RBP16.96■□□□□ 0.31
TRIM27-201ENST00000377194 TCEA1P23193 301 aaKnown RBP16.96■□□□□ 0.31
TRIM27-201ENST00000377194 SLC11A2P49281 568 aa16.96■□□□□ 0.31
TRIM27-201ENST00000377194 ZNF140P52738 457 aaPredicted RBP16.96■□□□□ 0.31
TRIM27-201ENST00000377194 FOXA1P55317 472 aa16.96■□□□□ 0.31
TRIM27-201ENST00000377194 DMPKQ09013 629 aa16.96■□□□□ 0.31
TRIM27-201ENST00000377194 SF3B4Q15427 424 aaKnown RBP eCLIP16.96■□□□□ 0.319e-9■■■■■ 30.5
TRIM27-201ENST00000377194 LARP4Q71RC2 724 aaKnown RBP eCLIP16.96■□□□□ 0.313e-8■□□□□ 9.9
TRIM27-201ENST00000377194 NAT16Q8N8M0 369 aa16.96■□□□□ 0.31
TRIM27-201ENST00000377194 PCYOX1LQ8NBM8 494 aa16.96■□□□□ 0.31
TRIM27-201ENST00000377194 AARSD1Q9BTE6 412 aaKnown RBP16.96■□□□□ 0.31
TRIM27-201ENST00000377194 CINPQ9BW66 212 aaPredicted RBP16.96■□□□□ 0.31
TRIM27-201ENST00000377194 TMEM181Q9P2C4 612 aa16.96■□□□□ 0.31
TRIM27-201ENST00000377194 GALPQ9UBC7 116 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms