RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 TFDP3Q5H9I0 405 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 FHL5Q5TD97 284 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 ALG1LQ6GMV1 187 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 SPOCD1Q6ZMY3 1216 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 BZW1Q7L1Q6 419 aaKnown RBP12.94□□□□□ -0.34
CLCN6-205ENST00000376492 LYSMD3Q7Z3D4 306 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 RFX6Q8HWS3 928 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 PLXDC1Q8IUK5 500 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 KRT35Q92764 455 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 SH3KBP1Q96B97 665 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 STAMBPL1Q96FJ0 436 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 C9orf72Q96LT7 481 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 OLFM3Q96PB7 478 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 TGM7Q96PF1 710 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 OR6C1Q96RD1 312 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 WDR24Q96S15 920 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 DESI2Q9BSY9 194 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 TRIM55Q9BYV6 548 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 TWSG1Q9GZX9 223 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 BRD8Q9H0E9 1235 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 NT5MQ9NPB1 228 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 RBM22Q9NW64 420 aaKnown RBP eCLIP12.94□□□□□ -0.342e-10■□□□□ 8.4
CLCN6-205ENST00000376492 VPS18Q9P253 973 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 VPS4AQ9UN37 437 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 HEY1Q9Y5J3 304 aa12.94□□□□□ -0.34
CLCN6-205ENST00000376492 KIR2DS5A0A0G2JLQ3 304 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 A0A0G2JNG1 304 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 A0A0J9YYE9 177 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 GRID2IPA4D2P6 1211 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 LILRA5A6NI73 299 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 KIR2DS3K7RE56 304 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 CST8O60676 142 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 CLDN7O95471 211 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 TRBC1P01850 177 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 C9P02748 559 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 PYGLP06737 847 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 ZNF30P17039 623 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 CTNNA2P26232 953 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 LEPRP48357 1165 aaKnown RBP12.93□□□□□ -0.34
CLCN6-205ENST00000376492 MARCKSL1P49006 195 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 COPS2P61201 443 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 ETF1P62495 437 aaKnown RBP12.93□□□□□ -0.34
CLCN6-205ENST00000376492 UBE2IP63279 158 aaKnown RBP12.93□□□□□ -0.34
CLCN6-205ENST00000376492 TUBB2AQ13885 445 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 KIR2DS5Q14953 304 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 NADK2Q4G0N4 442 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 NLRP8Q86W28 1048 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 EFCAB3Q8N7B9 438 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 GALNT11Q8NCW6 608 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 CCNYQ8ND76 341 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 TRIM58Q8NG06 486 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 CPT1CQ8TCG5 803 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 SSC4DQ8WTU2 575 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 LRRN4Q8WUT4 740 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 RBM41Q96IZ5 413 aaKnown RBP12.93□□□□□ -0.34
CLCN6-205ENST00000376492 PLEKHG4BQ96PX9 1271 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 RUFY1Q96T51 708 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 TUBB2BQ9BVA1 445 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.93□□□□□ -0.34
CLCN6-205ENST00000376492 POLR1EQ9GZS1 481 aaKnown RBP12.93□□□□□ -0.34
CLCN6-205ENST00000376492 ARFGAP3Q9NP61 516 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 HAUS2Q9NVX0 235 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 SCHIP1Q9P0W5 487 aaPredicted RBP12.93□□□□□ -0.34
CLCN6-205ENST00000376492 LNPEPQ9UIQ6 1025 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 EFR3BQ9Y2G0 817 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 SLC30A1Q9Y6M5 507 aa12.93□□□□□ -0.34
CLCN6-205ENST00000376492 hCG_1818297A0A087WSY0 165 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 A0A0U1RQJ8 604 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 PIPSLA2A3N6 862 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 CCDC66A2RUB6 948 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 PPP1R12AO14974 1030 aaPredicted RBP12.92□□□□□ -0.34
CLCN6-205ENST00000376492 KIF1CO43896 1103 aaKnown RBP12.92□□□□□ -0.34
CLCN6-205ENST00000376492 CREG1O75629 220 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 TIAF1O95411 115 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 JCHAINP01591 159 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 EPHB1P54762 984 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 IFI35P80217 286 aaPredicted RBP12.92□□□□□ -0.34
CLCN6-205ENST00000376492 DSC2Q02487 901 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 ADCY2Q08462 1091 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 ITKQ08881 620 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 DNASE1L3Q13609 305 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 PPP2R5EQ16537 467 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 ZNF648Q5T619 568 aaPredicted RBP12.92□□□□□ -0.34
CLCN6-205ENST00000376492 CPZQ66K79 652 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 NPNTQ6UXI9 565 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 NT5DC3Q86UY8 548 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 PHYKPLQ8IUZ5 450 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 RASGRP3Q8IV61 690 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 SYCE1Q8N0S2 351 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 ARRDC2Q8TBH0 407 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 CT55Q8WUE5 264 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 OSGEPL1Q9H4B0 414 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 EPB41L1Q9H4G0 881 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 TRIM10Q9UDY6 481 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 CHKBQ9Y259 395 aa12.92□□□□□ -0.34
CLCN6-205ENST00000376492 MACROD2A1Z1Q3 448 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 KCNK1O00180 336 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 GRID2O43424 1007 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 RASSF9O75901 435 aa12.91□□□□□ -0.34
CLCN6-205ENST00000376492 UBXN7O94888 489 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms