RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 ZNF607Q96SK3 696 aa13.5□□□□□ -0.25
C9orf47-203ENST00000375851 KLHL25Q9H0H3 589 aa13.5□□□□□ -0.25
C9orf47-203ENST00000375851 SAMD4AQ9UPU9 718 aaKnown RBP13.5□□□□□ -0.25
C9orf47-203ENST00000375851 SCML2Q9UQR0 700 aa13.5□□□□□ -0.25
C9orf47-203ENST00000375851 PNMA8CA0A1B0GUJ8 204 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 SMIM31A0A1B0GVY4 71 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 AOC2O75106 756 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 ANXA4P09525 319 aaPredicted RBP13.49□□□□□ -0.25
C9orf47-203ENST00000375851 COL6A1P12109 1028 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 GSTT1P30711 240 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 BUD31P41223 144 aaPredicted RBP13.49□□□□□ -0.25
C9orf47-203ENST00000375851 GPR17Q13304 367 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 PLEKHG4Q58EX7 1191 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 LRRC73Q5JTD7 316 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 OSBPL10Q9BXB5 764 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 GPR88Q9GZN0 384 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 NUAK2Q9H093 628 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 PNPLA8Q9NP80 782 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 KLHL1Q9NR64 748 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 FNIP2Q9P278 1114 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 FADS3Q9Y5Q0 445 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 ENO2P09104 434 aaPredicted RBP13.49□□□□□ -0.25
C9orf47-203ENST00000375851 C21orf59P57076 290 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 CCNYL2Q5T2Q4 361 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 OR7A2PQ8NGA2 310 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 MCMBPQ9BTE3 642 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 RWDD3Q9Y3V2 267 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 ZNF780BQ9Y6R6 833 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 SLC28A2O43868 658 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 F7P08709 466 aaPredicted RBP13.49□□□□□ -0.25
C9orf47-203ENST00000375851 GALNT2Q10471 571 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 TRAF7Q6Q0C0 670 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 TMEM220Q6QAJ8 160 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 LUZP2Q86TE4 346 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 PIWIL1Q96J94 861 aaKnown RBP13.49□□□□□ -0.25
C9orf47-203ENST00000375851 TDRD1Q9BXT4 1180 aaKnown RBP13.49□□□□□ -0.25
C9orf47-203ENST00000375851 MFSD1Q9H3U5 465 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 CLN6Q9NWW5 311 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 ATP6V1HQ9UI12 483 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 DAPK2Q9UIK4 370 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 KIF13AQ9H1H9 1805 aa13.49□□□□□ -0.25
C9orf47-203ENST00000375851 AP3D1O14617 1153 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 UGT1A6P19224 532 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 UGT1A1P22309 533 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 UGT1A4P22310 534 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 UGT1A3P35503 534 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 UGT1A5P35504 534 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 C2orf80Q0P641 193 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 BIKQ13323 160 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 C9orf64Q5T6V5 341 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 REP15Q6BDI9 236 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 PARGQ86W56 976 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 UBR7Q8N806 425 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 TFB2MQ9H5Q4 396 aaKnown RBP13.48□□□□□ -0.25
C9orf47-203ENST00000375851 CLK4Q9HAZ1 481 aaKnown RBP13.48□□□□□ -0.25
C9orf47-203ENST00000375851 MFHAS1Q9Y4C4 1052 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 ELOVL7A1L3X0 281 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 NIPSNAP2O75323 286 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 OR6A2O95222 327 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 GSTM5P46439 218 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 SLC11A1P49279 550 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 ZNF132P52740 706 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 SLC18A1P54219 525 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 DEPDC7Q96QD5 511 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 FNDC11Q9BVV2 318 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 STMN3Q9NZ72 180 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 TRBV23OR9-2A0A075B6M9 112 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 G3V2T6 193 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 MT-ND1P03886 318 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 OLIG2Q13516 323 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 SIRPB2Q5JXA9 342 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 PDZK1Q5T2W1 519 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 DEF8Q6ZN54 512 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 OR52L1Q8NGH7 329 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 OXSMQ9NWU1 459 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 PRRC2BQ5JSZ5 2229 aaKnown RBP13.48□□□□□ -0.25
C9orf47-203ENST00000375851 EFCAB10A6NFE3 127 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 AHSGP02765 367 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 GJA1P17302 382 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 PTSQ03393 145 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 PRKD1Q15139 912 aaPredicted RBP13.48□□□□□ -0.25
C9orf47-203ENST00000375851 RSBN1Q5VWQ0 802 aaPredicted RBP13.48□□□□□ -0.25
C9orf47-203ENST00000375851 FAM156AQ8NDB6 213 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 SIGLEC10Q96LC7 697 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 NUSAP1Q9BXS6 441 aaKnown RBP13.48□□□□□ -0.25
C9orf47-203ENST00000375851 MRPS26Q9BYN8 205 aaKnown RBP13.48□□□□□ -0.25
C9orf47-203ENST00000375851 SERHL2Q9H4I8 314 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 ALG2Q9H553 416 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 C3orf14Q9HBI5 128 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 SERHLQ9NQF3 203 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 ZMYND8Q9ULU4 1186 aaPredicted RBP13.48□□□□□ -0.25
C9orf47-203ENST00000375851 ERVW-1Q9UQF0 538 aa13.48□□□□□ -0.25
C9orf47-203ENST00000375851 NBNO60934 754 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 ASLP04424 464 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 LSM3P62310 102 aaKnown RBP13.47□□□□□ -0.25
C9orf47-203ENST00000375851 TRIM25Q14258 630 aaKnown RBP13.47□□□□□ -0.25
C9orf47-203ENST00000375851 LPIN1Q14693 890 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 TMEM198Q66K66 360 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 SNX20Q7Z614 316 aa13.47□□□□□ -0.25
C9orf47-203ENST00000375851 ZC3HC1Q86WB0 502 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms