RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 IMPG1Q17R60 797 aa15.03■□□□□ -0
MSH5-203ENST00000375750 ZNF829Q3KNS6 432 aaPredicted RBP15.03■□□□□ -0
MSH5-203ENST00000375750 TRIM60Q495X7 471 aa15.03■□□□□ -0
MSH5-203ENST00000375750 PIWIL3Q7Z3Z3 882 aaKnown RBP15.03■□□□□ -0
MSH5-203ENST00000375750 SYVN1Q86TM6 617 aa15.03■□□□□ -0
MSH5-203ENST00000375750 GPR152Q8TDT2 470 aa15.03■□□□□ -0
MSH5-203ENST00000375750 BORCS5Q969J3 196 aa15.03■□□□□ -0
MSH5-203ENST00000375750 PPM1MQ96MI6 270 aa15.03■□□□□ -0
MSH5-203ENST00000375750 ATOH8Q96SQ7 321 aa15.03■□□□□ -0
MSH5-203ENST00000375750 CYP2S1Q96SQ9 504 aa15.03■□□□□ -0
MSH5-203ENST00000375750 DOK1Q99704 481 aa15.03■□□□□ -0
MSH5-203ENST00000375750 LHPPQ9H008 270 aa15.03■□□□□ -0
MSH5-203ENST00000375750 MFSD1Q9H3U5 465 aa15.03■□□□□ -0
MSH5-203ENST00000375750 ATP13A1Q9HD20 1204 aa15.03■□□□□ -0
MSH5-203ENST00000375750 SCN5AQ14524 2016 aa15.03■□□□□ -0
MSH5-203ENST00000375750 TBKBP1A7MCY6 615 aa15.03■□□□□ -0
MSH5-203ENST00000375750 TNFRSF10BO14763 440 aa15.03■□□□□ -0
MSH5-203ENST00000375750 MUSKO15146 869 aa15.03■□□□□ -0
MSH5-203ENST00000375750 CD3EAPO15446 510 aaKnown RBP15.03■□□□□ -0
MSH5-203ENST00000375750 COL6A1P12109 1028 aa15.03■□□□□ -0
MSH5-203ENST00000375750 CD97P48960 835 aa15.03■□□□□ -0
MSH5-203ENST00000375750 KCNK10P57789 538 aa15.03■□□□□ -0
MSH5-203ENST00000375750 RELAQ04206 551 aa15.03■□□□□ -0
MSH5-203ENST00000375750 TLE2Q04725 743 aa15.03■□□□□ -0
MSH5-203ENST00000375750 ITGADQ13349 1161 aa15.03■□□□□ -0
MSH5-203ENST00000375750 MARC1Q5VT66 337 aa15.03■□□□□ -0
MSH5-203ENST00000375750 CCDC117Q8IWD4 279 aaPredicted RBP15.03■□□□□ -0
MSH5-203ENST00000375750 CRIPAKQ8N1N5 446 aa15.03■□□□□ -0
MSH5-203ENST00000375750 TTC9BQ8N6N2 239 aa15.03■□□□□ -0
MSH5-203ENST00000375750 CARS2Q9HA77 564 aaKnown RBP15.03■□□□□ -0
MSH5-203ENST00000375750 SMURF2Q9HAU4 748 aa15.03■□□□□ -0
MSH5-203ENST00000375750 MARCH5Q9NX47 278 aa15.03■□□□□ -0
MSH5-203ENST00000375750 A0A1W2PP18 115 aa15.02■□□□□ -0
MSH5-203ENST00000375750 KANSL1LA0AUZ9 987 aa15.02■□□□□ -0
MSH5-203ENST00000375750 SLC7A4O43246 635 aa15.02■□□□□ -0
MSH5-203ENST00000375750 SOAT2O75908 522 aa15.02■□□□□ -0
MSH5-203ENST00000375750 TBX18O95935 607 aa15.02■□□□□ -0
MSH5-203ENST00000375750 CYBBP04839 570 aa15.02■□□□□ -0
MSH5-203ENST00000375750 HMBSP08397 361 aa15.02■□□□□ -0
MSH5-203ENST00000375750 FGF4P08620 206 aa15.02■□□□□ -0
MSH5-203ENST00000375750 ATXN1LP0C7T5 689 aaKnown RBP15.02■□□□□ -0
MSH5-203ENST00000375750 NR1D2Q14995 579 aa15.02■□□□□ -0
MSH5-203ENST00000375750 PTPRRQ15256 657 aa15.02■□□□□ -0
MSH5-203ENST00000375750 CTXN3Q4LDR2 81 aa15.02■□□□□ -0
MSH5-203ENST00000375750 AFMIDQ63HM1 303 aa15.02■□□□□ -0
MSH5-203ENST00000375750 TIGD7Q6NT04 549 aaPredicted RBP15.02■□□□□ -0
MSH5-203ENST00000375750 PRMT9Q6P2P2 845 aa15.02■□□□□ -0
MSH5-203ENST00000375750 ATAD1Q8NBU5 361 aa15.02■□□□□ -0
MSH5-203ENST00000375750 DDHD1Q8NEL9 900 aa15.02■□□□□ -0
MSH5-203ENST00000375750 ARNT2Q9HBZ2 717 aa15.02■□□□□ -0
MSH5-203ENST00000375750 PKD2L2Q9NZM6 624 aa15.02■□□□□ -0
MSH5-203ENST00000375750 NPEPPSL1A6NEC2 478 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 CCDC154A6NI56 674 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 NOBOXO60393 691 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 XYLBO75191 536 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 ECI2O75521 394 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 CYP2A13Q16696 494 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 SETMARQ53H47 684 aaPredicted RBP15.02□□□□□ -0.01
MSH5-203ENST00000375750 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.02□□□□□ -0.018e-8■□□□□ 10.5
MSH5-203ENST00000375750 USP51Q70EK9 711 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 TAS1R1Q7RTX1 841 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 RAB44Q7Z6P3 723 aaPredicted RBP15.02□□□□□ -0.01
MSH5-203ENST00000375750 STK32CQ86UX6 486 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 RNF112Q9ULX5 631 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 FGF10O15520 208 aaPredicted RBP15.02□□□□□ -0.01
MSH5-203ENST00000375750 GLP2RO95838 553 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 ALBP02768 609 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 GPIP06744 558 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 HOXC13P31276 330 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 DGKQP52824 942 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 C18orf21Q32NC0 220 aaPredicted RBP15.02□□□□□ -0.01
MSH5-203ENST00000375750 IRAK1BP1Q5VVH5 260 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 XAF1Q6GPH4 301 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 RSPO2Q6UXX9 243 aaPredicted RBP15.02□□□□□ -0.01
MSH5-203ENST00000375750 PARP8Q8N3A8 854 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 FBXO39Q8N4B4 442 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 OR13F1Q8NGS4 319 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 ARRDC2Q8TBH0 407 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 TMBIM1Q969X1 311 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 MYEOVQ96EZ4 313 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 SP110Q9HB58 689 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 TBCCD1Q9NVR7 557 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 TRNAU1APQ9NX07 287 aaKnown RBP15.02□□□□□ -0.01
MSH5-203ENST00000375750 SLC27A5Q9Y2P5 690 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 PCDHGA11Q9Y5H2 935 aa15.02□□□□□ -0.01
MSH5-203ENST00000375750 ZNF701M0R085 212 aaPredicted RBP15.01□□□□□ -0.01
MSH5-203ENST00000375750 UPK1AO00322 258 aa15.01□□□□□ -0.01
MSH5-203ENST00000375750 ADAM23O75077 832 aa15.01□□□□□ -0.01
MSH5-203ENST00000375750 MATN4O95460 622 aa15.01□□□□□ -0.01
MSH5-203ENST00000375750 CCNA2P20248 432 aa15.01□□□□□ -0.01
MSH5-203ENST00000375750 HLCSP50747 726 aa15.01□□□□□ -0.01
MSH5-203ENST00000375750 ZNF135P52742 658 aaPredicted RBP15.01□□□□□ -0.01
MSH5-203ENST00000375750 NFKB2Q00653 900 aa15.01□□□□□ -0.01
MSH5-203ENST00000375750 CCNYL2Q5T2Q4 361 aa15.01□□□□□ -0.01
MSH5-203ENST00000375750 GLYATQ6IB77 296 aa15.01□□□□□ -0.01
MSH5-203ENST00000375750 ANKRD33Q7Z3H0 272 aa15.01□□□□□ -0.01
MSH5-203ENST00000375750 NPAS4Q8IUM7 802 aa15.01□□□□□ -0.01
MSH5-203ENST00000375750 PDZD8Q8NEN9 1154 aa15.01□□□□□ -0.01
MSH5-203ENST00000375750 SLC22A17Q8WUG5 538 aa15.01□□□□□ -0.01
MSH5-203ENST00000375750 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms