RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 ZNF469Q96JG9 3925 aaPredicted RBP17.09■□□□□ 0.33
H2AFX-201ENST00000375167 A0A0U1RQS6 177 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 SERPINC1P01008 464 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 CYP11B1P15538 503 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 PBX1P40424 430 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 GABRB2P47870 512 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 ARCN1P48444 511 aaKnown RBP17.08■□□□□ 0.32
H2AFX-201ENST00000375167 SCNN1BP51168 640 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 JAM2P57087 298 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 NCF4Q15080 339 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 PLEKHS1Q5SXH7 462 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 UMODL1-AS1Q8N2C9 162 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 EXD1Q8NHP7 514 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 DNAJB14Q8TBM8 379 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 CNDP1Q96KN2 507 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 NAP1L5Q96NT1 182 aaPredicted RBP17.08■□□□□ 0.32
H2AFX-201ENST00000375167 MDFIQ99750 246 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 SPOCK3Q9BQ16 436 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 MAGEB5Q9BZ81 275 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 ABCG8Q9H221 673 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 RMI1Q9H9A7 625 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 NLRC4Q9NPP4 1024 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 POT1Q9NUX5 634 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 CSPG4Q6UVK1 2322 aa17.08■□□□□ 0.32
H2AFX-201ENST00000375167 PCM1Q15154 2024 aa17.07■□□□□ 0.32
H2AFX-201ENST00000375167 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.07■□□□□ 0.32
H2AFX-201ENST00000375167 NPIPB15A6NHN6 443 aaPredicted RBP17.07■□□□□ 0.32
H2AFX-201ENST00000375167 C9J4A7 227 aa17.07■□□□□ 0.32
H2AFX-201ENST00000375167 CREB3O43889 395 aa17.07■□□□□ 0.32
H2AFX-201ENST00000375167 ATP1A1P05023 1023 aaKnown RBP17.07■□□□□ 0.32
H2AFX-201ENST00000375167 FECHP22830 423 aa17.07■□□□□ 0.32
H2AFX-201ENST00000375167 SOX5P35711 763 aa17.07■□□□□ 0.32
H2AFX-201ENST00000375167 NR1I3Q14994 352 aa17.07■□□□□ 0.32
H2AFX-201ENST00000375167 RAB6CQ53S08 254 aa17.07■□□□□ 0.32
H2AFX-201ENST00000375167 TECPR1Q7Z6L1 1165 aa17.07■□□□□ 0.32
H2AFX-201ENST00000375167 TMEM35BQ8NCS4 154 aa17.07■□□□□ 0.32
H2AFX-201ENST00000375167 SPATA3Q8NHX4 192 aa17.07■□□□□ 0.32
H2AFX-201ENST00000375167 SCAMP4Q969E2 229 aa17.07■□□□□ 0.32
H2AFX-201ENST00000375167 CLIP3Q96DZ5 547 aa17.07■□□□□ 0.32
H2AFX-201ENST00000375167 RAB6CQ9H0N0 254 aa17.07■□□□□ 0.32
H2AFX-201ENST00000375167 CATSPERBQ9H7T0 1116 aa17.07■□□□□ 0.32
H2AFX-201ENST00000375167 TMEM59LQ9UK28 342 aa17.07■□□□□ 0.32
H2AFX-201ENST00000375167 PCDH17O14917 1159 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 SOCS5O75159 536 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 GFPT2O94808 682 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 CAPN1P07384 714 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 AGAP20933 346 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 TNFAIP3P21580 790 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 SLC19A1P41440 591 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 KIR3DL1P43629 444 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 HSD11B2P80365 405 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 FANCCQ00597 558 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 NSUN2Q08J23 767 aaKnown RBP eCLIP17.06■□□□□ 0.32
H2AFX-201ENST00000375167 Q0VFX4 171 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 GPR19Q15760 415 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 GFRALQ6UXV0 394 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 USP45Q70EL2 814 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 ARCQ7LC44 396 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 TSPAN33Q86UF1 283 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 RBM12BQ8IXT5 1001 aaKnown RBP17.06■□□□□ 0.32
H2AFX-201ENST00000375167 SYTL1Q8IYJ3 562 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 CCDC185Q8N715 623 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 GBP5Q96PP8 586 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 PDCL3Q9H2J4 239 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 ABCA4P78363 2273 aa17.06■□□□□ 0.32
H2AFX-201ENST00000375167 TPM3P06753 285 aa17.05■□□□□ 0.32
H2AFX-201ENST00000375167 RORAP35398 523 aa17.05■□□□□ 0.32
H2AFX-201ENST00000375167 CA7P43166 264 aa17.05■□□□□ 0.32
H2AFX-201ENST00000375167 SMSP52788 366 aa17.05■□□□□ 0.32
H2AFX-201ENST00000375167 SOX8P57073 446 aa17.05■□□□□ 0.32
H2AFX-201ENST00000375167 PPP1CAP62136 330 aa17.05■□□□□ 0.32
H2AFX-201ENST00000375167 LTBQ06643 244 aa17.05■□□□□ 0.32
H2AFX-201ENST00000375167 GPR18Q14330 331 aa17.05■□□□□ 0.32
H2AFX-201ENST00000375167 TLR1Q15399 786 aa17.05■□□□□ 0.32
H2AFX-201ENST00000375167 C15orf59Q2T9L4 293 aaPredicted RBP17.05■□□□□ 0.32
H2AFX-201ENST00000375167 TMEM207Q6UWW9 146 aa17.05■□□□□ 0.32
H2AFX-201ENST00000375167 CERS6Q6ZMG9 384 aa17.05■□□□□ 0.32
H2AFX-201ENST00000375167 SPOCD1Q6ZMY3 1216 aa17.05■□□□□ 0.32
H2AFX-201ENST00000375167 NOP9Q86U38 636 aaKnown RBP17.05■□□□□ 0.32
H2AFX-201ENST00000375167 EMC1Q8N766 993 aa17.05■□□□□ 0.32
H2AFX-201ENST00000375167 ZNF501Q96CX3 271 aaPredicted RBP17.05■□□□□ 0.32
H2AFX-201ENST00000375167 SCHIP1Q9P0W5 487 aaPredicted RBP17.05■□□□□ 0.32
H2AFX-201ENST00000375167 ZNF624Q9P2J8 865 aaPredicted RBP17.05■□□□□ 0.32
H2AFX-201ENST00000375167 PRRC2AP48634 2157 aaKnown RBP17.05■□□□□ 0.32
H2AFX-201ENST00000375167 JMJD1CQ15652 2540 aa17.05■□□□□ 0.32
H2AFX-201ENST00000375167 NCOA6Q14686 2063 aaPredicted RBP17.05■□□□□ 0.32
H2AFX-201ENST00000375167 RTTNQ86VV8 2226 aa17.05■□□□□ 0.32
H2AFX-201ENST00000375167 PDZK1P1A8MUH7 402 aa17.04■□□□□ 0.32
H2AFX-201ENST00000375167 HTRA2O43464 458 aaPredicted RBP17.04■□□□□ 0.32
H2AFX-201ENST00000375167 SDC4P31431 198 aa17.04■□□□□ 0.32
H2AFX-201ENST00000375167 HADHAP40939 763 aa17.04■□□□□ 0.32
H2AFX-201ENST00000375167 CLCNKAP51800 687 aa17.04■□□□□ 0.32
H2AFX-201ENST00000375167 UBASH3AP57075 661 aa17.04■□□□□ 0.32
H2AFX-201ENST00000375167 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.04■□□□□ 0.325e-7■□□□□ 8.1
H2AFX-201ENST00000375167 TMTC4Q5T4D3 741 aa17.04■□□□□ 0.32
H2AFX-201ENST00000375167 RFLNAQ6ZTI6 216 aa17.04■□□□□ 0.32
H2AFX-201ENST00000375167 NLRP8Q86W28 1048 aa17.04■□□□□ 0.32
H2AFX-201ENST00000375167 ZNF677Q86XU0 584 aa17.04■□□□□ 0.32
H2AFX-201ENST00000375167 D2HGDHQ8N465 521 aa17.04■□□□□ 0.32
H2AFX-201ENST00000375167 MSANTD4Q8NCY6 345 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms