RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 SCN10AQ9Y5Y9 1956 aa4.87□□□□□ -1.63
USP48-202ENST00000374730 MYO18AQ92614 2054 aaKnown RBP4.87□□□□□ -1.63
USP48-202ENST00000374730 TDRD15B5MCY1 1934 aaKnown RBP4.86□□□□□ -1.63
USP48-202ENST00000374730 IQANK1A0A1B0GTG1 560 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 TCRBV7S3A2A0A539 114 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 GLTPD2A6NH11 291 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 FOXO6A8MYZ6 492 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 KBTBD13C9JR72 458 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 GOLGA8MH3BSY2 632 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 H7C0C1 242 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 HAS3O00219 553 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 PIRO00625 290 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 PPEF2O14830 753 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 CHUKO15111 745 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 MGRN1O60291 552 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 EDF1O60869 148 aaKnown RBP4.86□□□□□ -1.63
USP48-202ENST00000374730 SPAG7O75391 227 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 BANF1O75531 89 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 ZNF189O75820 626 aaPredicted RBP4.86□□□□□ -1.63
USP48-202ENST00000374730 ZBED1O96006 694 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 IL1BP01584 269 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 C1QAP02745 245 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 POU2F2P09086 479 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 SMIM10L2AP0DMW4 78 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 SMIM10L2BP0DMW5 78 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 CYP2C9P11712 490 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 CCNB1P14635 433 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 TYRP14679 529 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 CA4P22748 312 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 WARSP23381 471 aaKnown RBP4.86□□□□□ -1.63
USP48-202ENST00000374730 SSTR1P30872 391 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 MSH2P43246 934 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 MAGEA3P43357 314 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 PSMC4P43686 418 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 ACADSBP45954 432 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 ATP5OP48047 213 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 NR2C2P49116 596 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 RGS7P49802 495 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 NEK3P51956 506 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 HDAC4P56524 1084 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 YWHAZP63104 245 aaKnown RBP4.86□□□□□ -1.63
USP48-202ENST00000374730 BASP1P80723 227 aaKnown RBP4.86□□□□□ -1.63
USP48-202ENST00000374730 GAD2Q05329 585 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 SLC18A2Q05940 514 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 BST2Q10589 180 aaKnown RBP4.86□□□□□ -1.63
USP48-202ENST00000374730 RIPK1Q13546 671 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 ZKSCAN8Q15776 578 aaPredicted RBP4.86□□□□□ -1.63
USP48-202ENST00000374730 SNCBQ16143 134 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 CDO1Q16878 200 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 FBXO47Q5MNV8 452 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 TEDDM1Q5T9Z0 273 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 HHATQ5VTY9 493 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 IL31Q6EBC2 164 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 PMF1Q6P1K2 205 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 DARS2Q6PI48 645 aaKnown RBP4.86□□□□□ -1.63
USP48-202ENST00000374730 NPNTQ6UXI9 565 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 CHST15Q7LFX5 561 aaPredicted RBP4.86□□□□□ -1.63
USP48-202ENST00000374730 STRADAQ7RTN6 431 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 DPP9Q86TI2 863 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 ACOT1Q86TX2 421 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 CHSY1Q86X52 802 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 PSTKQ8IV42 348 aaKnown RBP4.86□□□□□ -1.63
USP48-202ENST00000374730 C4orf33Q8N1A6 199 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 C12orf29Q8N999 325 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 BANPQ8N9N5 519 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 CCDC63Q8NA47 563 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 ANKRD52Q8NB46 1076 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 MCUQ8NE86 351 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 GDAP1Q8TB36 358 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 LRRC8CQ8TDW0 803 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 HASPINQ8TF76 798 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 KBTBD7Q8WVZ9 684 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 SLC44A1Q8WWI5 657 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 APBB2Q92870 758 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 RFKQ969G6 155 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 TIFAQ96CG3 184 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 QKIQ96PU8 341 aaKnown RBP eCLIP4.86□□□□□ -1.63
USP48-202ENST00000374730 SNRNP25Q9BV90 132 aaKnown RBP4.86□□□□□ -1.63
USP48-202ENST00000374730 EIF2AQ9BY44 585 aaKnown RBP4.86□□□□□ -1.63
USP48-202ENST00000374730 ACTRT3Q9BYD9 372 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 KRTAP9-8Q9BYQ0 159 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 PITPNM3Q9BZ71 974 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 TPSD1Q9BZJ3 242 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 AMBRA1Q9C0C7 1298 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 SMOC2Q9H3U7 446 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 C10orf88Q9H8K7 445 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 KIF9Q9HAQ2 790 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 USP29Q9HBJ7 922 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 MLXIPLQ9NP71 852 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 SLAMF7Q9NQ25 335 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 SETD4Q9NVD3 440 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 RCOR3Q9P2K3 495 aaPredicted RBP4.86□□□□□ -1.63
USP48-202ENST00000374730 CHMP2BQ9UQN3 213 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 LZTS1Q9Y250 596 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 USH1CQ9Y6N9 552 aa4.86□□□□□ -1.63
USP48-202ENST00000374730 SF3B1O75533 1304 aaKnown RBP eCLIP4.86□□□□□ -1.639e-6■■■■■ 68.9
USP48-202ENST00000374730 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.85□□□□□ -1.63
USP48-202ENST00000374730 SMIM28A0A1B0GU29 152 aa4.85□□□□□ -1.63
USP48-202ENST00000374730 A0A1W2PPM1 405 aa4.85□□□□□ -1.63
USP48-202ENST00000374730 TCRBV9S1A1TA0A576 114 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms