RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 UCKL1Q9NWZ5 548 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 MARCH4Q9P2E8 410 aaPredicted RBP11.21□□□□□ -0.61
HSPG2-202ENST00000374676 GPSM3Q9Y4H4 160 aa11.21□□□□□ -0.61
HSPG2-202ENST00000374676 PCYT1BQ9Y5K3 369 aaPredicted RBP11.21□□□□□ -0.61
HSPG2-202ENST00000374676 DMXL1Q9Y485 3027 aa11.21□□□□□ -0.62
HSPG2-202ENST00000374676 DNAH14Q0VDD8 3507 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 KLHL33A6NCF5 533 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 GOLGA8KD6RF30 607 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 F8W8V4 182 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 GOLGA8TH3BQL2 631 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 QSOX1O00391 747 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 SLC30A4O14863 429 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 TM4SF5O14894 197 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 YY2O15391 372 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 SGTAO43765 313 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 SDC3O75056 442 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 ANXA6P08133 673 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 GSTA2P09210 222 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 GSTM1P09488 218 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 ZNF7P17097 686 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-202ENST00000374676 SDHBP21912 280 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 RPS3P23396 243 aaKnown RBP eCLIP11.2□□□□□ -0.62
HSPG2-202ENST00000374676 PMLP29590 882 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 GRK6P43250 576 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 GSTM4Q03013 218 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 ILF3Q12906 894 aaKnown RBP eCLIP11.2□□□□□ -0.62
HSPG2-202ENST00000374676 C1orf61Q13536 156 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 HLTFQ14527 1009 aaKnown RBP eCLIP11.2□□□□□ -0.62
HSPG2-202ENST00000374676 TYSND1Q2T9J0 566 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 INAVAQ3KP66 663 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 RNF187Q5TA31 235 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-202ENST00000374676 CHST15Q7LFX5 561 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-202ENST00000374676 TAF8Q7Z7C8 310 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 PIP4P1Q86T03 277 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 KCNMB4Q86W47 210 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 CCDC25Q86WR0 208 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 NRROSQ86YC3 692 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 CILP2Q8IUL8 1156 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 CNTN4Q8IWV2 1026 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 PALM2Q8IXS6 379 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 OR4C6Q8NH72 309 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 GSDMBQ8TAX9 411 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 CCDC97Q96F63 343 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-202ENST00000374676 CERS2Q96G23 380 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 CFAP36Q96G28 342 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 LINC00615Q96LM1 132 aaPredicted RBP11.2□□□□□ -0.62
HSPG2-202ENST00000374676 FMO2Q99518 471 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 FAM167BQ9BTA0 163 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 DUSP23Q9BVJ7 150 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 BOCQ9BWV1 1114 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 NLGN3Q9NZ94 848 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 MOCS1Q9NZB8 636 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 VPS9D1Q9Y2B5 631 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 PLEKHM1Q9Y4G2 1056 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 ST14Q9Y5Y6 855 aa11.2□□□□□ -0.62
HSPG2-202ENST00000374676 COL5A1P20908 1838 aaPredicted RBP11.19□□□□□ -0.62
HSPG2-202ENST00000374676 KNTC1P50748 2209 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 CFAP54Q96N23 3096 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 RP1P56715 2156 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 C17orf113A0A1B0GUU1 675 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 PRR19A6NJB7 356 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 OR2AG2A6NM03 316 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 PRMT5O14744 637 aaPredicted RBP11.19□□□□□ -0.62
HSPG2-202ENST00000374676 OR1I1O60431 355 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 NDUFS3O75489 264 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 POP7O75817 140 aaKnown RBP11.19□□□□□ -0.62
HSPG2-202ENST00000374676 S1PR4O95977 384 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 CELA2BP08218 269 aaPredicted RBP11.19□□□□□ -0.62
HSPG2-202ENST00000374676 ALPPL2P10696 532 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 PRLHRP49683 370 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 ADARP55265 1226 aaKnown RBP11.19□□□□□ -0.62
HSPG2-202ENST00000374676 DMPKQ09013 629 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 HSP90AA5PQ58FG0 334 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 ZNF470Q6ECI4 717 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 ZNF449Q6P9G9 518 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 OGFOD3Q6PK18 319 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 KIAA0408Q6ZU52 694 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 GALNT7Q86SF2 657 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 LDB1Q86U70 411 aaPredicted RBP11.19□□□□□ -0.62
HSPG2-202ENST00000374676 AMZ2Q86W34 360 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 LRRC6Q86X45 466 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 TRAPPC5Q8IUR0 188 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 UNC5BQ8IZJ1 945 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 CLDN19Q8N6F1 224 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 OTUD6BQ8N6M0 293 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 PNPLA1Q8N8W4 532 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 FAM181AQ8N9Y4 354 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 CCL4L1Q8NHW4 92 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 RHBDD1Q8TEB9 315 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 SETD7Q8WTS6 366 aaKnown RBP11.19□□□□□ -0.62
HSPG2-202ENST00000374676 LPGAT1Q92604 370 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 C9orf72Q96LT7 481 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 P2RY12Q9H244 342 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 IARS2Q9NSE4 1012 aaKnown RBP11.19□□□□□ -0.62
HSPG2-202ENST00000374676 KLC4Q9NSK0 619 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 INTS10Q9NVR2 710 aaKnown RBP11.19□□□□□ -0.62
HSPG2-202ENST00000374676 IL1RAPL1Q9NZN1 696 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 SLC23A2Q9UGH3 650 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 FBXO5Q9UKT4 447 aa11.19□□□□□ -0.62
HSPG2-202ENST00000374676 NFU1Q9UMS0 254 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms