RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 HMX2A2RU54 273 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 TMEM247A6NEH6 219 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 MATN2O00339 956 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 FFAR2O15552 330 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 TBX10O75333 385 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 RNASEH2AO75792 299 aaKnown RBP7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 HNF1BP35680 557 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 NSG1P42857 185 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 CTSOP43234 321 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 LEPRP48357 1165 aaKnown RBP7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 PRIM2P49643 509 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 HERVK_113P63132 956 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 SLC20A2Q08357 652 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 SMYD5Q6GMV2 418 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 CCSAPQ6IQ19 270 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 KIAA1324Q6UXG2 1013 aaKnown RBP7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 GDPD4Q6W3E5 623 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 SNX20Q7Z614 316 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 FBXW8Q8N3Y1 598 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 ARRDC2Q8TBH0 407 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 CSGALNACT1Q8TDX6 532 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 SLC7A6OSQ96CW6 309 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 RIOK2Q9BVS4 552 aaKnown RBP7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 ERVK-6Q9BXR3 956 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 SLC46A2Q9BY10 475 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 TRIM4Q9C037 500 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 AKTIPQ9H8T0 292 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 NMRK1Q9NWW6 199 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 COMMD8Q9NX08 183 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 KCTD5Q9NXV2 234 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 KIF17Q9P2E2 1029 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 SLC13A4Q9UKG4 626 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 POMPQ9Y244 141 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 SNX8Q9Y5X2 465 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 MAGEC1O60732 1142 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 SLC22A3O75751 556 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 DHRS4L1P0CG22 281 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 NELFEP18615 380 aaKnown RBP7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 KCNA5P22460 613 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 C22orf39Q6P5X5 142 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 TXNDC11Q6PKC3 985 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 TMEM220Q6QAJ8 160 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 ANKRD46Q86W74 232 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 PGBD5Q8N414 524 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 CATSPER1Q8NEC5 780 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 SKA1Q96BD8 255 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 RTKNQ9BST9 563 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 BOCQ9BWV1 1114 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 TRIM8Q9BZR9 551 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 EMCNQ9ULC0 261 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 MTF2Q9Y483 593 aaPredicted RBP7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 AP4S1Q9Y587 144 aa7.05□□□□□ -1.28
TGFBR3-202ENST00000370399 PAPPA2Q9BXP8 1791 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 TBC1D3DA0A087WVF3 549 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 TBC1D3IA0A087WXS9 549 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 TBC1D3EA0A087X179 549 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 TBC1D3KA0A087X1G2 549 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 TBC1D3FA6NER0 549 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 TBC1D3LB9A6J9 549 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 C1QTNF3-AMACRE9PGA6 284 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 H3BM21 787 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 PPP6CO00743 305 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 LDB2O43679 373 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 NPHS1O60500 1241 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 CAPN15O75808 1086 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 PAPSS2O95340 614 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 NFATC1O95644 943 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 CA3P07451 260 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 TBC1D3HP0C7X1 549 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 HSPA1AP0DMV8 641 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 HSPA1BP0DMV9 641 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 CTSAP10619 480 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 GTF2H2Q13888 395 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 PLCL1Q15111 1095 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 ZNF648Q5T619 568 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 PPP2R2DQ66LE6 453 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 KCTD11Q693B1 232 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 TBC1D3GQ6DHY5 549 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 TBC1D3CQ6IPX1 549 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 GTF2H2CQ6P1K8 395 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 TBC1D3Q8IZP1 549 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 ZNF786Q8N393 782 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 BEND7Q8N7W2 519 aaPredicted RBP7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 WBP2Q969T9 261 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 PPP1R16AQ96I34 528 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 MTERF1Q99551 399 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 NOL6Q9H6R4 1146 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 IL23AQ9NPF7 189 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 ZNF212Q9UDV6 495 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 INVSQ9Y283 1065 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 PRKAB1Q9Y478 270 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 ZNFX1Q9P2E3 1918 aaKnown RBP7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 SLC31A1O15431 190 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 PGLSO95336 258 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 MAGEA3P43357 314 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 NEK2P51955 445 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 ERVFC1P60507 584 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 VAC14Q08AM6 782 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 GRM2Q14416 872 aa7.04□□□□□ -1.28
TGFBR3-202ENST00000370399 ATAT1Q5SQI0 421 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms