RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 CLCN7P51798 805 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 TIAL1Q01085 375 aaKnown RBP eCLIP12.15□□□□□ -0.46
TUBE1-202ENST00000368662 GSTM4Q03013 218 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 ZNF460Q14592 562 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 CCDC153Q494R4 210 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 TMEM31Q5JXX7 168 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 KLC3Q6P597 504 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 OTOAQ7RTW8 1153 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 CADM4Q8NFZ8 388 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 INPP5DQ92835 1189 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 CCDC97Q96F63 343 aaPredicted RBP12.15□□□□□ -0.46
TUBE1-202ENST00000368662 GPR174Q9BXC1 333 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 C6orf106Q9H6K1 298 aaPredicted RBP12.15□□□□□ -0.46
TUBE1-202ENST00000368662 GPR34Q9UPC5 381 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 PLLPQ9Y342 182 aa12.15□□□□□ -0.46
TUBE1-202ENST00000368662 A6NNZ2 444 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 CACNB4O00305 520 aaPredicted RBP12.14□□□□□ -0.47
TUBE1-202ENST00000368662 TRIM16O95361 564 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 APOA4P06727 396 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 LTA4HP09960 611 aaKnown RBP12.14□□□□□ -0.47
TUBE1-202ENST00000368662 IGFALSP35858 605 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 PRLHRP49683 370 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 ATP1A2P50993 1020 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 TUBB8Q3ZCM7 444 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 BCL7AQ4VC05 210 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 KHDC1Q4VXA5 237 aaKnown RBP12.14□□□□□ -0.47
TUBE1-202ENST00000368662 SLC36A4Q6YBV0 504 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 DET1Q7L5Y6 550 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 ADGRG6Q86SQ4 1221 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 PIM3Q86V86 326 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 CENPLQ8N0S6 344 aaPredicted RBP12.14□□□□□ -0.47
TUBE1-202ENST00000368662 FAM174AQ8TBP5 190 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 CD200R1Q8TD46 325 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 SGF29Q96ES7 293 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 C1QTNF1Q9BXJ1 281 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 OR2AG1Q9H205 316 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 HS3ST3A1Q9Y663 406 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 CCDC189A1A4V9 331 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 PRAMEF26H0Y7S4 382 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 EIF3FO00303 357 aaPredicted RBP12.14□□□□□ -0.47
TUBE1-202ENST00000368662 RAD51BO15315 384 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 POLR3GO15318 223 aaPredicted RBP12.14□□□□□ -0.47
TUBE1-202ENST00000368662 FSBPO95073 299 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 ASMTLO95671 621 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 IGHV4-34P06331 123 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 CCDC166P0CW27 439 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 CBSLP0DN79 551 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 CHN1P15882 459 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 DGKAP23743 735 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 CBSP35520 551 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 PXNP49023 591 aaPredicted RBP12.14□□□□□ -0.47
TUBE1-202ENST00000368662 RGS4P49798 205 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 IL2P60568 153 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 IRF9Q00978 393 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 ACAP2Q15057 778 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 LRRC8EQ6NSJ5 796 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 PAQR3Q6TCH7 311 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 ZBTB2Q8N680 514 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 ANKRD42Q8N9B4 389 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 RASGEF1AQ8N9B8 481 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 SIDT2Q8NBJ9 832 aaKnown RBP12.14□□□□□ -0.47
TUBE1-202ENST00000368662 DENND1AQ8TEH3 1009 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 RLN3Q8WXF3 142 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 FAM136AQ96C01 138 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 NMRAL1Q9HBL8 299 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 SARS2Q9NP81 518 aaKnown RBP12.14□□□□□ -0.47
TUBE1-202ENST00000368662 PRMT8Q9NR22 394 aaPredicted RBP12.14□□□□□ -0.47
TUBE1-202ENST00000368662 INTS9Q9NV88 658 aaKnown RBP12.14□□□□□ -0.47
TUBE1-202ENST00000368662 ATXN10Q9UBB4 475 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 MID2Q9UJV3 735 aa12.14□□□□□ -0.47
TUBE1-202ENST00000368662 KLHL33A6NCF5 533 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 OR2AG2A6NM03 316 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 IQCF5A8MTL0 148 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 LAMTOR5O43504 91 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 KELP23276 732 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 KIAA1024LP59773 190 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 ATP6V0D1P61421 351 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 YPEL5P62699 121 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 MPP2Q14168 576 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 CSHL1Q14406 222 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 PLEKHS1Q5SXH7 462 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 N4BP2L1Q5TBK1 243 aaPredicted RBP12.13□□□□□ -0.47
TUBE1-202ENST00000368662 HHATQ5VTY9 493 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 TMEM220Q6QAJ8 160 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 CDHR3Q6ZTQ4 885 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 KCTD4Q8WVF5 259 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 FUBP1Q96AE4 644 aaKnown RBP12.13□□□□□ -0.47
TUBE1-202ENST00000368662 BIRC7Q96CA5 298 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 PDLIM5Q96HC4 596 aaKnown RBP12.13□□□□□ -0.47
TUBE1-202ENST00000368662 FAM111AQ96PZ2 611 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 CCM2Q9BSQ5 444 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 APOOQ9BUR5 198 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 DERL2Q9GZP9 239 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 RMI1Q9H9A7 625 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 FZD3Q9NPG1 666 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 RUVBL2Q9Y230 463 aaKnown RBP12.13□□□□□ -0.47
TUBE1-202ENST00000368662 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.13□□□□□ -0.47
TUBE1-202ENST00000368662 OR1A2Q9Y585 309 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 A0A1W2PPC4 97 aa12.13□□□□□ -0.47
TUBE1-202ENST00000368662 CHUKO15111 745 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms