RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 ZSCAN26Q16670 478 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 QPCTQ16769 361 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 TPRG1LQ5T0D9 272 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 ESRP1Q6NXG1 681 aaKnown RBP9.9□□□□□ -0.82
TPM3-210ENST00000368530 LVRNQ6Q4G3 990 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 IGF2-ASQ6U949 168 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 DPY19L3Q6ZPD9 716 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 Q6ZSR6 202 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 CYS1Q717R9 158 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 ERN2Q76MJ5 926 aaKnown RBP9.9□□□□□ -0.82
TPM3-210ENST00000368530 STRA8Q7Z7C7 330 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 ZNF605Q86T29 641 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 LRRC34Q8IZ02 419 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 BANPQ8N9N5 519 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 TCP10LQ8TDR4 215 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 CHMP6Q96FZ7 201 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 PRR11Q96HE9 360 aaPredicted RBP9.9□□□□□ -0.82
TPM3-210ENST00000368530 APOPT1Q96IL0 206 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 MGME1Q9BQP7 344 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 SEMA4CQ9C0C4 833 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 TNKS2Q9H2K2 1166 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 NOD2Q9HC29 1040 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 CPNE5Q9HCH3 593 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 PCMTD2Q9NV79 361 aa9.9□□□□□ -0.82
TPM3-210ENST00000368530 COL27A1Q8IZC6 1860 aaPredicted RBP9.9□□□□□ -0.82
TPM3-210ENST00000368530 SPTY2D1-AS1A0A0U1RR47 76 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 WDR91A4D1P6 747 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 TCP11X1B4DZS4 312 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 ERVH48-1M5A8F1 160 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 COPEO14579 308 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 CASC3O15234 703 aaKnown RBP9.89□□□□□ -0.83
TPM3-210ENST00000368530 CSO75390 466 aaKnown RBP9.89□□□□□ -0.83
TPM3-210ENST00000368530 LEFTY1O75610 366 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 RFPL1O75677 317 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 VAPBO95292 243 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 PAK4O96013 591 aaPredicted RBP9.89□□□□□ -0.83
TPM3-210ENST00000368530 CSF2P04141 144 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 PRNPP04156 253 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 PRKCGP05129 697 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 PIRTP0C851 137 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 DRD4P21917 467 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 ADRA1DP25100 572 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 AKT2P31751 481 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 GP5P40197 560 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 SERPINH1P50454 418 aaKnown RBP9.89□□□□□ -0.83
TPM3-210ENST00000368530 PCBP4P57723 403 aaKnown RBP9.89□□□□□ -0.83
TPM3-210ENST00000368530 GABREP78334 506 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 CDK18Q07002 472 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 RFTN1Q14699 578 aaPredicted RBP9.89□□□□□ -0.83
TPM3-210ENST00000368530 ZKSCAN8Q15776 578 aaPredicted RBP9.89□□□□□ -0.83
TPM3-210ENST00000368530 TEDDM1Q5T9Z0 273 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 C22orf39Q6P5X5 142 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 ZNF783Q6ZMS7 281 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 CPLX4Q7Z7G2 160 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 LSMEM2Q8N112 164 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 DCAF4L2Q8NA75 395 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 DENND1AQ8TEH3 1009 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 CKAP2Q8WWK9 683 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 TTC9Q92623 222 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 COL26A1Q96A83 441 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 TADA1Q96BN2 335 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 MTBPQ96DY7 904 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 WBP1Q96G27 269 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 NAF1Q96HR8 494 aaKnown RBP9.89□□□□□ -0.83
TPM3-210ENST00000368530 SGSM3Q96HU1 749 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 NSMCE3Q96MG7 304 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 HS3ST6Q96QI5 342 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 PSKH2Q96QS6 385 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 CPNE1Q99829 537 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 C2orf49Q9BVC5 232 aaPredicted RBP9.89□□□□□ -0.83
TPM3-210ENST00000368530 SLC17A9Q9BYT1 436 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 SLC13A1Q9BZW2 595 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 POLR1BQ9H9Y6 1135 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 SSU72Q9NP77 194 aaKnown RBP9.89□□□□□ -0.83
TPM3-210ENST00000368530 HAUS2Q9NVX0 235 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 GRID1Q9ULK0 1009 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 FCF1Q9Y324 198 aaKnown RBP9.89□□□□□ -0.83
TPM3-210ENST00000368530 FADS3Q9Y5Q0 445 aa9.89□□□□□ -0.83
TPM3-210ENST00000368530 HEATR9A2RTY3 570 aa9.88□□□□□ -0.83
TPM3-210ENST00000368530 CCL22O00626 93 aa9.88□□□□□ -0.83
TPM3-210ENST00000368530 TPP1O14773 563 aa9.88□□□□□ -0.83
TPM3-210ENST00000368530 INSIG1O15503 277 aa9.88□□□□□ -0.83
TPM3-210ENST00000368530 SPINT1O43278 529 aa9.88□□□□□ -0.83
TPM3-210ENST00000368530 BUD23O43709 281 aaKnown RBP9.88□□□□□ -0.83
TPM3-210ENST00000368530 PCDH8O95206 1070 aa9.88□□□□□ -0.83
TPM3-210ENST00000368530 ZWINTO95229 277 aa9.88□□□□□ -0.83
TPM3-210ENST00000368530 ASMTLO95671 621 aa9.88□□□□□ -0.83
TPM3-210ENST00000368530 FAM107AO95990 144 aa9.88□□□□□ -0.83
TPM3-210ENST00000368530 ITGA2BP08514 1039 aa9.88□□□□□ -0.83
TPM3-210ENST00000368530 NME1P15531 152 aaKnown RBP9.88□□□□□ -0.83
TPM3-210ENST00000368530 CNTFP26441 200 aa9.88□□□□□ -0.83
TPM3-210ENST00000368530 FOXN2P32314 431 aa9.88□□□□□ -0.83
TPM3-210ENST00000368530 NEK3P51956 506 aa9.88□□□□□ -0.83
TPM3-210ENST00000368530 RHOAP61586 193 aa9.88□□□□□ -0.83
TPM3-210ENST00000368530 HNRNPKP61978 463 aaKnown RBP eCLIP9.88□□□□□ -0.83
TPM3-210ENST00000368530 PDE1BQ01064 536 aa9.88□□□□□ -0.83
TPM3-210ENST00000368530 SLC18A2Q05940 514 aa9.88□□□□□ -0.83
TPM3-210ENST00000368530 FRG1Q14331 258 aaKnown RBP9.88□□□□□ -0.83
TPM3-210ENST00000368530 CNGA3Q16281 694 aa9.88□□□□□ -0.83
TPM3-210ENST00000368530 ISXQ2M1V0 245 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms