RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 SLC2A4P14672 509 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 LPOP22079 712 aaPredicted RBP12.2□□□□□ -0.46
PTPN7-202ENST00000367279 VARSP26640 1264 aaKnown RBP12.2□□□□□ -0.46
PTPN7-202ENST00000367279 GATMP50440 423 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 HK3P52790 923 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 ERVK-8P63133 956 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 RCAN2Q14206 197 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 RAB39AQ14964 217 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 KCTD21Q4G0X4 260 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 SETMARQ53H47 684 aaPredicted RBP12.2□□□□□ -0.46
PTPN7-202ENST00000367279 KLHL35Q6PF15 583 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 XKR5Q6UX68 686 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 TBC1D21Q8IYX1 336 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 PACRGLQ8N7B6 248 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 MFSD2AQ8NA29 543 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 OR6K2Q8NGY2 324 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 ITFG1Q8TB96 612 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 SOCS4Q8WXH5 440 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 TRIB2Q92519 343 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 BDH2Q9BUT1 245 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 GPR62Q9BZJ7 368 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 ZFP14Q9HCL3 533 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 GABRQQ9UN88 632 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 MED16Q9Y2X0 877 aa12.2□□□□□ -0.46
PTPN7-202ENST00000367279 IGLV3-10A0A075B6K4 115 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 RPS17P08708 135 aaKnown RBP12.19□□□□□ -0.46
PTPN7-202ENST00000367279 NR4A1P22736 598 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 IST1P53990 364 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 ERVPABLB-1P60509 514 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 IL1RL1Q01638 556 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 TNK2Q07912 1038 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 MYBPC3Q14896 1274 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 PYCR3Q53H96 274 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 RNF19BQ6ZMZ0 732 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 OSCP1Q8WVF1 389 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 NCLNQ969V3 563 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 MTFMTQ96DP5 389 aaKnown RBP12.19□□□□□ -0.46
PTPN7-202ENST00000367279 FUBP3Q96I24 572 aaKnown RBP eCLIP12.19□□□□□ -0.46
PTPN7-202ENST00000367279 MUS81Q96NY9 551 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 NPLQ9BXD5 320 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-202ENST00000367279 GKN1Q9NS71 199 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 ACOX3O15254 700 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 OAZ2O95190 189 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 MAP4P27816 1152 aaKnown RBP12.19□□□□□ -0.46
PTPN7-202ENST00000367279 MAPKAPK2P49137 400 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 CLCN2P51788 898 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 ZNF140P52738 457 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-202ENST00000367279 RPL38P63173 70 aaKnown RBP12.19□□□□□ -0.46
PTPN7-202ENST00000367279 CTBSQ01459 385 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 ACVR1Q04771 509 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 TRAF2Q12933 501 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 LAPTM5Q13571 262 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 TBC1D25Q3MII6 688 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 PTRHD1Q6GMV3 140 aaKnown RBP12.19□□□□□ -0.46
PTPN7-202ENST00000367279 LETMD1Q6P1Q0 360 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 RTN4RL1Q86UN2 441 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-202ENST00000367279 GPR180Q86V85 440 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 CLHC1Q8NHS4 586 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 SDCCAG3Q96C92 435 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 OSBPL6Q9BZF3 934 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 GPR63Q9BZJ6 419 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 POPDC3Q9HBV1 291 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 WARS2Q9UGM6 360 aaKnown RBP12.19□□□□□ -0.46
PTPN7-202ENST00000367279 PTPRDP23468 1912 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 PDE4DIPQ5VU43 2346 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 FNDC1Q4ZHG4 1894 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-202ENST00000367279 NLRC5Q86WI3 1866 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 DRGXA6NNA5 263 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 FAM155AB1AL88 458 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-202ENST00000367279 H0Y626 953 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 EEDO75530 441 aaKnown RBP12.19□□□□□ -0.46
PTPN7-202ENST00000367279 TRIM16O95361 564 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 HOXD9P28356 352 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-202ENST00000367279 SUOXP51687 545 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 TAF1AQ15573 450 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-202ENST00000367279 TYSND1Q2T9J0 566 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 AP5B1Q2VPB7 878 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 EFL1Q7Z2Z2 1120 aaKnown RBP12.19□□□□□ -0.46
PTPN7-202ENST00000367279 PROKR1Q8TCW9 393 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 SMPD4Q9NXE4 827 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 IFT80Q9P2H3 777 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-202ENST00000367279 LIMD1Q9UGP4 676 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 SLC30A1Q9Y6M5 507 aa12.19□□□□□ -0.46
PTPN7-202ENST00000367279 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.18□□□□□ -0.46
PTPN7-202ENST00000367279 MOXD2PA6NHM9 499 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 NOBOXO60393 691 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 SNAP91O60641 907 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 GJB5O95377 273 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 EPOP01588 193 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 HRH2P25021 359 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 CTGFP29279 349 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 GDF5P43026 501 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 HSPA7P48741 367 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 CHRNB3Q05901 458 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 BNIP3Q12983 259 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 ZNF177Q13360 481 aaPredicted RBP12.18□□□□□ -0.46
PTPN7-202ENST00000367279 TGFBIQ15582 683 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 IMPG1Q17R60 797 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 ANKDD1AQ495B1 522 aa12.18□□□□□ -0.46
PTPN7-202ENST00000367279 CYBRD1Q53TN4 286 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms