RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 AKT1P31749 480 aa20.72■□□□□ 0.91
MAP1LC3A-201ENST00000360668 ABCE1P61221 599 aaKnown RBP20.72■□□□□ 0.91
MAP1LC3A-201ENST00000360668 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.72■□□□□ 0.91
MAP1LC3A-201ENST00000360668 CRLF3Q8IUI8 442 aa20.72■□□□□ 0.91
MAP1LC3A-201ENST00000360668 CPNE9Q8IYJ1 553 aa20.72■□□□□ 0.91
MAP1LC3A-201ENST00000360668 STAG3L4Q8TBR4 150 aa20.72■□□□□ 0.91
MAP1LC3A-201ENST00000360668 EEF1AKMT1Q8WVE0 214 aa20.72■□□□□ 0.91
MAP1LC3A-201ENST00000360668 FAM131CQ96AQ9 280 aa20.72■□□□□ 0.91
MAP1LC3A-201ENST00000360668 SGF29Q96ES7 293 aa20.72■□□□□ 0.91
MAP1LC3A-201ENST00000360668 LINGO1Q96FE5 620 aa20.72■□□□□ 0.91
MAP1LC3A-201ENST00000360668 GATA5Q9BWX5 397 aaPredicted RBP20.72■□□□□ 0.91
MAP1LC3A-201ENST00000360668 ACTR5Q9H9F9 607 aaPredicted RBP20.72■□□□□ 0.91
MAP1LC3A-201ENST00000360668 CD248Q9HCU0 757 aa20.72■□□□□ 0.91
MAP1LC3A-201ENST00000360668 PRDM4Q9UKN5 801 aa20.72■□□□□ 0.91
MAP1LC3A-201ENST00000360668 MAGEC1O60732 1142 aa20.71■□□□□ 0.91
MAP1LC3A-201ENST00000360668 KERAO60938 352 aa20.71■□□□□ 0.91
MAP1LC3A-201ENST00000360668 MSH3P20585 1137 aa20.71■□□□□ 0.91
MAP1LC3A-201ENST00000360668 COL9A1P20849 921 aa20.71■□□□□ 0.91
MAP1LC3A-201ENST00000360668 TAS2R38P59533 333 aa20.71■□□□□ 0.91
MAP1LC3A-201ENST00000360668 CCINQ13939 588 aa20.71■□□□□ 0.91
MAP1LC3A-201ENST00000360668 OR4D1Q15615 310 aa20.71■□□□□ 0.91
MAP1LC3A-201ENST00000360668 CACUL1Q86Y37 369 aa20.71■□□□□ 0.91
MAP1LC3A-201ENST00000360668 SLC22A9Q8IVM8 553 aa20.71■□□□□ 0.91
MAP1LC3A-201ENST00000360668 ZBTB2Q8N680 514 aa20.71■□□□□ 0.91
MAP1LC3A-201ENST00000360668 TRIM55Q9BYV6 548 aa20.71■□□□□ 0.91
MAP1LC3A-201ENST00000360668 C20orf27Q9GZN8 174 aa20.71■□□□□ 0.91
MAP1LC3A-201ENST00000360668 MKRN2Q9H000 416 aaKnown RBP20.71■□□□□ 0.91
MAP1LC3A-201ENST00000360668 SCML1Q9UN30 329 aa20.71■□□□□ 0.91
MAP1LC3A-201ENST00000360668 ATG2BQ96BY7 2078 aa20.71■□□□□ 0.91
MAP1LC3A-201ENST00000360668 PIKFYVEQ9Y2I7 2098 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 A0A1W2PP55 124 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 QSOX1O00391 747 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 MAN2B1O00754 1011 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 ITM2AO43736 263 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 SMIM24O75264 130 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 DNTTP04053 509 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 ITGB6P18564 788 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 DGKAP23743 735 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 KCNC1P48547 511 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 RGS4P49798 205 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 NFKB2Q00653 900 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 ZBTB16Q05516 673 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 OVGP1Q12889 678 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 TTLL9Q3SXZ7 439 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 EOGTQ5NDL2 527 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 NAPRTQ6XQN6 538 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 TMPRSS6Q8IU80 811 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 PHYKPLQ8IUZ5 450 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 PPP4R1Q8TF05 950 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 ATOH8Q96SQ7 321 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 ZNF395Q9H8N7 513 aaPredicted RBP20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 SERGEFQ9UGK8 458 aa20.7■□□□□ 0.9
MAP1LC3A-201ENST00000360668 A8MT66 165 aa20.69■□□□□ 0.9
MAP1LC3A-201ENST00000360668 RNASEH2AO75792 299 aaKnown RBP20.69■□□□□ 0.9
MAP1LC3A-201ENST00000360668 IPO13O94829 963 aaKnown RBP20.69■□□□□ 0.9
MAP1LC3A-201ENST00000360668 SOD1P00441 154 aa20.69■□□□□ 0.9
MAP1LC3A-201ENST00000360668 TPBGLP0DKB5 382 aa20.69■□□□□ 0.9
MAP1LC3A-201ENST00000360668 SF3A3Q12874 501 aaKnown RBP eCLIP20.69■□□□□ 0.9
MAP1LC3A-201ENST00000360668 RPLP0P6Q8NHW5 317 aa20.69■□□□□ 0.9
MAP1LC3A-201ENST00000360668 NAT14Q8WUY8 206 aa20.69■□□□□ 0.9
MAP1LC3A-201ENST00000360668 DRC3Q9H069 523 aa20.69■□□□□ 0.9
MAP1LC3A-201ENST00000360668 NPHS2Q9NP85 383 aa20.69■□□□□ 0.9
MAP1LC3A-201ENST00000360668 CD320Q9NPF0 282 aa20.69■□□□□ 0.9
MAP1LC3A-201ENST00000360668 FBXL12Q9NXK8 326 aa20.69■□□□□ 0.9
MAP1LC3A-201ENST00000360668 DUSP12Q9UNI6 340 aa20.69■□□□□ 0.9
MAP1LC3A-201ENST00000360668 SYCE1LA8MT33 242 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 EIF3FO00303 357 aaPredicted RBP20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 BTN3A1O00481 513 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 LYPLA1O75608 230 aaPredicted RBP20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 TM7SF2O76062 418 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 CBSLP0DN79 551 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 CBSP35520 551 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 SERPINB5P36952 375 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 GPR1P46091 355 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 NAGLUP54802 743 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 AGERQ15109 404 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 MLF2Q15773 248 aaPredicted RBP20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 PIWIL4Q7Z3Z4 852 aaKnown RBP20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 SORT1Q99523 831 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 IKZF3Q9UKT9 509 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 CNOT6Q9ULM6 557 aaKnown RBP20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 RNF112Q9ULX5 631 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 NPEPPSL1A6NEC2 478 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 NEMP2A6NFY4 417 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 CDC7O00311 574 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 NPHS1O60500 1241 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 MTX2O75431 263 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 DCTN3O75935 186 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 SNUPNO95149 360 aaKnown RBP20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 PCDH8O95206 1070 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 RCN2Q14257 317 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 TSNQ15631 228 aaKnown RBP20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 TTC31Q49AM3 519 aaPredicted RBP20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 KHDC1Q4VXA5 237 aaKnown RBP20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 SPDYAQ5MJ70 313 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 RAET1GQ6H3X3 334 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 GANCQ8TET4 914 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 C10orf82Q8WW14 230 aa20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 FUBP1Q96AE4 644 aaKnown RBP20.68■□□□□ 0.9
MAP1LC3A-201ENST00000360668 NCKIPSDQ9NZQ3 722 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms