RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 SKA1Q96BD8 255 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 FEM1AQ9BSK4 669 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 PCDHGB3Q9Y5G1 929 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 COL1A2P08123 1366 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 ADM5C9JUS6 153 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 PIP5K1BO14986 540 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 DLG1Q12959 904 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 SERPINA13PQ6UXR4 307 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 OR10A6Q8NH74 314 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 FTHL17Q9BXU8 183 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 FAM105AQ9NUU6 356 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 TBX10O75333 385 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 NCK1P16333 377 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 AZGP1P25311 298 aaKnown RBP14.71□□□□□ -0.05
CHD4-201ENST00000357008 NMBRP28336 390 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 L1CAMP32004 1257 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 AP3S2P59780 193 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 PPP2R2BQ00005 443 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 CREMQ03060 361 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 GTF2H2Q13888 395 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 E2F2Q14209 437 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 USP41Q3LFD5 358 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 TSTD2Q5T7W7 516 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 GTF2H2CQ6P1K8 395 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 XAGE5Q8WWM1 108 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 CLIP3Q96DZ5 547 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 FERD3LQ96RJ6 166 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 TTYH1Q9H313 450 aaPredicted RBP14.71□□□□□ -0.05
CHD4-201ENST00000357008 KIAA1522Q9P206 1035 aaPredicted RBP14.71□□□□□ -0.05
CHD4-201ENST00000357008 DNAJB9Q9UBS3 223 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 SLC27A6Q9Y2P4 619 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 RAI2Q9Y5P3 530 aa14.71□□□□□ -0.05
CHD4-201ENST00000357008 E9PAM4 449 aa14.71□□□□□ -0.06
CHD4-201ENST00000357008 CXCR6O00574 342 aa14.71□□□□□ -0.06
CHD4-201ENST00000357008 RTL4Q6ZR62 310 aa14.71□□□□□ -0.06
CHD4-201ENST00000357008 TMPRSS11BQ86T26 416 aa14.71□□□□□ -0.06
CHD4-201ENST00000357008 ERI1Q8IV48 349 aaKnown RBP14.71□□□□□ -0.06
CHD4-201ENST00000357008 GJD3Q8N144 294 aa14.71□□□□□ -0.06
CHD4-201ENST00000357008 MAB21L3Q8N8X9 362 aa14.71□□□□□ -0.06
CHD4-201ENST00000357008 TRIM17Q9Y577 477 aa14.71□□□□□ -0.06
CHD4-201ENST00000357008 A0A1W2PQH9 124 aa14.71□□□□□ -0.06
CHD4-201ENST00000357008 C9JVG2 144 aa14.71□□□□□ -0.06
CHD4-201ENST00000357008 MATN3O15232 486 aa14.71□□□□□ -0.06
CHD4-201ENST00000357008 ANXA4P09525 319 aaPredicted RBP14.71□□□□□ -0.06
CHD4-201ENST00000357008 ELFN1P0C7U0 828 aa14.71□□□□□ -0.06
CHD4-201ENST00000357008 C2orf80Q0P641 193 aa14.71□□□□□ -0.06
CHD4-201ENST00000357008 RAPSNQ13702 412 aa14.71□□□□□ -0.06
CHD4-201ENST00000357008 IKBKEQ14164 716 aa14.71□□□□□ -0.06
CHD4-201ENST00000357008 HERC3Q15034 1050 aa14.71□□□□□ -0.06
CHD4-201ENST00000357008 GPC2Q8N158 579 aa14.71□□□□□ -0.06
CHD4-201ENST00000357008 GLB1L3Q8NCI6 653 aaPredicted RBP14.71□□□□□ -0.06
CHD4-201ENST00000357008 RASSF5Q8WWW0 418 aa14.71□□□□□ -0.06
CHD4-201ENST00000357008 SLC38A4Q969I6 547 aa14.71□□□□□ -0.06
CHD4-201ENST00000357008 A0A0X1KG70 313 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 AQP12BA6NM10 295 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 ERN1O75460 977 aaKnown RBP14.7□□□□□ -0.06
CHD4-201ENST00000357008 IFNA6P05013 189 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 ARFIP1P53367 373 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 ESRP1Q6NXG1 681 aaKnown RBP14.7□□□□□ -0.06
CHD4-201ENST00000357008 STX12Q86Y82 276 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 ZDHHC21Q8IVQ6 265 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 AQP12AQ8IXF9 295 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 OR52J3Q8NH60 311 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 SUN5Q8TC36 379 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 ACAT2Q9BWD1 397 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 PLK2Q9NYY3 685 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 ZNF510Q9Y2H8 683 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 SMIM28A0A1B0GU29 152 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 C2CD4BA6NLJ0 364 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 ORC5O43913 435 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 KERAO60938 352 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 HSPA7P48741 367 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 OGFOD2Q6N063 350 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 CXorf57Q6NSI4 855 aaKnown RBP14.7□□□□□ -0.06
CHD4-201ENST00000357008 BTN2A1Q7KYR7 527 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 LDB1Q86U70 411 aaPredicted RBP14.7□□□□□ -0.06
CHD4-201ENST00000357008 RFKQ969G6 155 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 TMEM39AQ9NV64 488 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 INTS10Q9NVR2 710 aaKnown RBP14.7□□□□□ -0.06
CHD4-201ENST00000357008 MAP10Q9P2G4 905 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 CLEC4AQ9UMR7 237 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 PCDHGA10Q9Y5H3 936 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 H3BNH8 94 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 CCNB2O95067 398 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 BRCC3P46736 316 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 SLC18A1P54219 525 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 MERTKQ12866 999 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 CFAP52Q8N1V2 620 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 C1orf127Q8N9H9 656 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 ZNF354BQ96LW1 612 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 EBF4Q9BQW3 602 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 SOHLH2Q9NX45 425 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 ZNF224Q9NZL3 707 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 HMGXB4Q9UGU5 601 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 IL1BP01584 269 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 RPIAP49247 311 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 TPTEP56180 551 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 SMARCB1Q12824 385 aa14.7□□□□□ -0.06
CHD4-201ENST00000357008 CBX2Q14781 532 aaPredicted RBP14.7□□□□□ -0.06
CHD4-201ENST00000357008 MYBPC3Q14896 1274 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms